Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 6
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G365500.1 | Wheat | mitochondrion | 95.04 | 95.04 |
| TraesCS1D01G354400.1 | Wheat | mitochondrion | 93.62 | 93.62 |
| TraesCS1A01G354900.1 | Wheat | mitochondrion | 79.43 | 82.96 |
| HORVU1Hr1G081010.1 | Barley | mitochondrion | 75.18 | 77.94 |
| Os04t0683400-00 | Rice | mitochondrion | 60.28 | 68.0 |
| EES13127 | Sorghum | mitochondrion | 58.87 | 64.84 |
| Zm00001d026648_P001 | Maize | mitochondrion | 56.74 | 62.99 |
| GSMUA_Achr3P00060_001 | Banana | mitochondrion, plastid | 42.55 | 57.14 |
| VIT_02s0025g03770.t01 | Wine grape | mitochondrion | 45.39 | 55.17 |
| KRH27143 | Soybean | mitochondrion | 41.13 | 47.15 |
| KRH22187 | Soybean | mitochondrion | 41.13 | 47.15 |
| Solyc08g007960.1.1 | Tomato | mitochondrion | 37.59 | 42.74 |
| TraesCS7A01G239500.1 | Wheat | nucleus | 37.59 | 26.63 |
| TraesCS5A01G256500.1 | Wheat | nucleus | 37.59 | 26.11 |
| TraesCS4A01G081000.1 | Wheat | nucleus | 39.01 | 22.82 |
| TraesCS7A01G475400.1 | Wheat | nucleus | 38.3 | 21.01 |
| TraesCS6A01G157900.1 | Wheat | nucleus | 36.17 | 19.92 |
| TraesCS7A01G474800.1 | Wheat | nucleus | 30.5 | 18.38 |
| TraesCS7A01G336700.1 | Wheat | cytosol | 20.57 | 7.0 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G355900.1 | EnsemblPlantsGene:TraesCS1A01G355900 | Gene3D:1.10.20.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046982 | InterPro:CBFA_NFYB_domain | InterPro:Histone-fold | InterPro:IPR009072 | PANTHER:PTHR10252 | PANTHER:PTHR10252:SF41 |
| PFAM:PF00808 | SEG:seg | SUPFAM:SSF47113 | MapMan:15.5.51.3 | : | : |
Description
No Description!
Coordinates
chr1A:-:539279131..539279556
Molecular Weight (calculated)
14788.7 Da
IEP (calculated)
10.030
GRAVY (calculated)
-0.185
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLPSPYTGV FRGGSTARTG PHALPLARIK KIMKRSARDG SGGDGAGARM ISCEAPVLFS RACELFVAEL TRAAWDATLE GRRRTVHAED VAAAVRDTNV
101: FDFLVDVVKA RPSDDGVNAG DGEGGVAPAV GVHGGMQGRR L
101: FDFLVDVVKA RPSDDGVNAG DGEGGVAPAV GVHGGMQGRR L
001: MDQQGQSSAM NYGSNPYQTN AMTTTPTGSD HPAYHQIHQQ QQQQLTQQLQ SFWETQFKEI EKTTDFKNHS LPLARIKKIM KADEDVRMIS AEAPVVFARA
101: CEMFILELTL RSWNHTEENK RRTLQKNDIA AAVTRTDIFD FLVDIVPRED LRDEVLGGVG AEAATAAGYP YGYLPPGTAP IGNPGMVMGN PGAYPPNPYM
201: GQPMWQQPGP EQQDPDN
101: CEMFILELTL RSWNHTEENK RRTLQKNDIA AAVTRTDIFD FLVDIVPRED LRDEVLGGVG AEAATAAGYP YGYLPPGTAP IGNPGMVMGN PGAYPPNPYM
201: GQPMWQQPGP EQQDPDN
Arabidopsis Description
NFYC3Nuclear transcription factor Y subunit C-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.