Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d026648_P001 | Maize | mitochondrion | 91.41 | 92.13 |
| Os04t0683400-00 | Rice | mitochondrion | 76.56 | 78.4 |
| GSMUA_Achr3P00060_001 | Banana | mitochondrion, plastid | 54.69 | 66.67 |
| HORVU1Hr1G081010.1 | Barley | mitochondrion | 68.75 | 64.71 |
| TraesCS1D01G355600.1 | Wheat | mitochondrion | 67.97 | 64.44 |
| TraesCS1A01G354900.1 | Wheat | mitochondrion | 67.97 | 64.44 |
| VIT_02s0025g03770.t01 | Wine grape | mitochondrion | 57.03 | 62.93 |
| TraesCS1B01G366800.1 | Wheat | mitochondrion | 67.19 | 62.32 |
| TraesCS1D01G354400.1 | Wheat | mitochondrion | 65.62 | 59.57 |
| TraesCS1B01G365500.1 | Wheat | mitochondrion | 65.62 | 59.57 |
| TraesCS1A01G355900.1 | Wheat | mitochondrion | 64.84 | 58.87 |
| KRH22187 | Soybean | mitochondrion | 53.12 | 55.28 |
| KRH27143 | Soybean | mitochondrion | 53.12 | 55.28 |
| Solyc08g007960.1.1 | Tomato | mitochondrion | 49.22 | 50.81 |
| EER96945 | Sorghum | nucleus | 40.62 | 25.74 |
| EES15444 | Sorghum | nucleus | 39.84 | 25.37 |
| KXG39763 | Sorghum | nucleus | 43.75 | 22.67 |
| EER88787 | Sorghum | nucleus | 42.97 | 21.57 |
| KXG24666 | Sorghum | nucleus | 36.72 | 20.98 |
| KXG24590 | Sorghum | nucleus | 41.41 | 20.95 |
| OQU83181 | Sorghum | nucleus | 23.44 | 17.54 |
| EES15819 | Sorghum | nucleus | 21.88 | 6.91 |
| EES14613 | Sorghum | nucleus | 21.88 | 6.07 |
| EES16679 | Sorghum | nucleus | 18.75 | 5.17 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.5.51.3 | EntrezGene:8085894 | UniProt:C5YAN6 | InterPro:CBFA_NFYB_domain | EnsemblPlants:EES13127 |
| ProteinID:EES13127 | ProteinID:EES13127.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046982 | InterPro:Histone-fold | InterPro:IPR009072 |
| PFAM:PF00808 | PANTHER:PTHR10252 | PANTHER:PTHR10252:SF41 | EnsemblPlantsGene:SORBI_3006G272400 | SUPFAM:SSF47113 | UniParc:UPI0001A8762E |
| RefSeq:XP_002448799.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:60396573..60397611
Molecular Weight (calculated)
13584.0 Da
IEP (calculated)
6.096
GRAVY (calculated)
-0.214
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: MRQARPYSGI FCGGVSARTG PHALPLARIK KIMKRSAGET ADGGARMISG EAPVVFSKAC ELFVAELTRR AWAATLDGKR RTVHREDVAT AVHNTDLFDF
101: LVDVVTADTA GGDDDVHDDD NVGDGALG
101: LVDVVTADTA GGDDDVHDDD NVGDGALG
001: MEQSEEGQQQ QQQGVMDYVP PHAYQSGPVN AASHMAFQQA HHFHHHHQQQ QQQQLQMFWA NQMQEIEHTT DFKNHTLPLA RIKKIMKADE DVRMISAEAP
101: VIFAKACEMF ILELTLRAWI HTEENKRRTL QKNDIAAAIS RTDVFDFLVD IIPRDELKEE GLGVTKGTIP SVVGSPPYYY LQQQGMMQHW PQEQHPDES
101: VIFAKACEMF ILELTLRAWI HTEENKRRTL QKNDIAAAIS RTDVFDFLVD IIPRDELKEE GLGVTKGTIP SVVGSPPYYY LQQQGMMQHW PQEQHPDES
Arabidopsis Description
NFYC2Nuclear transcription factor Y subunit C-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LCG7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.