Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 2
- mitochondrion 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0025g03770.t01 | Wine grape | mitochondrion | 66.67 | 60.34 |
| Os04t0683400-00 | Rice | mitochondrion | 70.48 | 59.2 |
| KRH22187 | Soybean | mitochondrion | 66.67 | 56.91 |
| KRH27143 | Soybean | mitochondrion | 64.76 | 55.28 |
| Zm00001d026648_P001 | Maize | mitochondrion | 66.67 | 55.12 |
| EES13127 | Sorghum | mitochondrion | 66.67 | 54.69 |
| Solyc08g007960.1.1 | Tomato | mitochondrion | 63.81 | 54.03 |
| HORVU1Hr1G081010.1 | Barley | mitochondrion | 59.05 | 45.59 |
| TraesCS1D01G355600.1 | Wheat | mitochondrion | 58.1 | 45.19 |
| TraesCS1A01G354900.1 | Wheat | mitochondrion | 58.1 | 45.19 |
| TraesCS1B01G366800.1 | Wheat | mitochondrion | 58.1 | 44.2 |
| TraesCS1D01G354400.1 | Wheat | mitochondrion | 59.05 | 43.97 |
| TraesCS1B01G365500.1 | Wheat | mitochondrion | 58.1 | 43.26 |
| TraesCS1A01G355900.1 | Wheat | mitochondrion | 57.14 | 42.55 |
| GSMUA_Achr10P... | Banana | cytosol, extracellular, nucleus | 35.24 | 29.37 |
| GSMUA_Achr6P16620_001 | Banana | cytosol | 47.62 | 26.32 |
| GSMUA_Achr10P... | Banana | nucleus | 47.62 | 25.77 |
| GSMUA_Achr4P03920_001 | Banana | nucleus | 29.52 | 22.79 |
| GSMUA_Achr11P... | Banana | cytosol | 52.38 | 21.65 |
| GSMUA_Achr4P13170_001 | Banana | nucleus | 29.52 | 21.23 |
| GSMUA_Achr11P... | Banana | cytosol | 58.1 | 19.87 |
| GSMUA_Achr3P11990_001 | Banana | nucleus | 29.52 | 19.5 |
| GSMUA_Achr1P19420_001 | Banana | nucleus | 31.43 | 16.92 |
| GSMUA_Achr5P26790_001 | Banana | cytosol | 32.38 | 15.18 |
| GSMUA_Achr3P23600_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 35.24 | 14.34 |
| GSMUA_Achr9P11550_001 | Banana | cytosol, nucleus, plasma membrane | 52.38 | 8.06 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P00060_001 | EnsemblPlants:GSMUA_Achr3T00060_001 | EnsemblPlantsGene:GSMUA_Achr3G00060_001 | Gene3D:1.10.20.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046982 | InterPro:CBFA_NFYB_domain | InterPro:Histone-fold | InterPro:IPR009072 | PANTHER:PTHR10252 |
| PANTHER:PTHR10252:SF41 | PFAM:PF00808 | SEG:seg | SUPFAM:SSF47113 | UniParc:UPI000294CA88 | UniProt:M0SAH4 |
| MapMan:15.5.51.3 | : | : | : | : | : |
Description
core histone H2A/H2B/H3/H4, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G00060_001]
Coordinates
chr3:+:107746..108063
Molecular Weight (calculated)
11536.3 Da
IEP (calculated)
11.509
GRAVY (calculated)
0.035
Length
105 amino acids
Sequence
(BLAST)
(BLAST)
001: MRQAGAYSSM LVGGVSGRTG PHSLPLARIK RIMKQSSDDV RMISAEAPVV FSKACELLIG VLVRRAWAAA LRRKRRTLLK EDVAAAVTNT DVFDFLVQVV
101: QQQPK
101: QQQPK
001: MDQQGQSSAM NYGSNPYQTN AMTTTPTGSD HPAYHQIHQQ QQQQLTQQLQ SFWETQFKEI EKTTDFKNHS LPLARIKKIM KADEDVRMIS AEAPVVFARA
101: CEMFILELTL RSWNHTEENK RRTLQKNDIA AAVTRTDIFD FLVDIVPRED LRDEVLGGVG AEAATAAGYP YGYLPPGTAP IGNPGMVMGN PGAYPPNPYM
201: GQPMWQQPGP EQQDPDN
101: CEMFILELTL RSWNHTEENK RRTLQKNDIA AAVTRTDIFD FLVDIVPRED LRDEVLGGVG AEAATAAGYP YGYLPPGTAP IGNPGMVMGN PGAYPPNPYM
201: GQPMWQQPGP EQQDPDN
Arabidopsis Description
NFYC3Nuclear transcription factor Y subunit C-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.