Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d031310_P001 | Maize | nucleus | 94.03 | 94.5 |
| EER96945 | Sorghum | nucleus | 80.6 | 80.2 |
| TraesCS7B01G135000.1 | Wheat | nucleus | 79.1 | 79.9 |
| Zm00001d052838_P001 | Maize | nucleus | 80.1 | 79.7 |
| TraesCS7D01G237100.1 | Wheat | nucleus | 78.61 | 79.4 |
| TraesCS7A01G239500.1 | Wheat | nucleus | 78.11 | 78.89 |
| HORVU7Hr1G048760.3 | Barley | plastid | 79.1 | 61.15 |
| GSMUA_Achr4P03920_001 | Banana | nucleus | 38.31 | 56.62 |
| GSMUA_Achr3P11990_001 | Banana | nucleus | 40.8 | 51.57 |
| GSMUA_Achr4P13170_001 | Banana | nucleus | 35.32 | 48.63 |
| EER88787 | Sorghum | nucleus | 59.2 | 46.67 |
| CDX93525 | Canola | nucleus | 48.76 | 44.55 |
| KRH68581 | Soybean | cytoskeleton, cytosol, nucleus, plastid | 52.24 | 44.3 |
| KXG24590 | Sorghum | nucleus | 55.72 | 44.27 |
| AT1G54830.3 | Thale cress | nucleus | 47.76 | 44.24 |
| Bra018589.1-P | Field mustard | nucleus | 48.26 | 44.09 |
| Bra030749.1-P | Field mustard | nucleus | 47.26 | 43.58 |
| Bra031651.1-P | Field mustard | nucleus | 48.76 | 42.98 |
| CDY06341 | Canola | nucleus | 48.76 | 42.98 |
| AT1G08970.4 | Thale cress | nucleus | 48.76 | 42.42 |
| VIT_05s0020g02790.t01 | Wine grape | nucleus | 54.23 | 41.6 |
| KXG39763 | Sorghum | nucleus | 50.75 | 41.3 |
| KRG96853 | Soybean | nucleus | 52.24 | 40.7 |
| PGSC0003DMT400023211 | Potato | nucleus | 51.74 | 40.62 |
| GSMUA_Achr1P19420_001 | Banana | nucleus | 39.3 | 40.51 |
| Solyc01g079870.2.1 | Tomato | nucleus | 51.74 | 40.31 |
| PGSC0003DMT400008660 | Potato | nucleus | 50.25 | 40.08 |
| EES13127 | Sorghum | mitochondrion | 25.37 | 39.84 |
| CDY31119 | Canola | nucleus | 37.81 | 39.79 |
| KRH43409 | Soybean | nucleus | 39.8 | 39.02 |
| CDY22654 | Canola | cytosol | 49.25 | 38.98 |
| VIT_14s0128g00250.t01 | Wine grape | nucleus | 50.75 | 38.78 |
| KRG92828 | Soybean | nucleus | 49.75 | 38.02 |
| KRH33966 | Soybean | nucleus | 49.75 | 37.88 |
| KRH20896 | Soybean | nucleus | 34.83 | 36.46 |
| KXG24666 | Sorghum | nucleus | 40.3 | 36.16 |
| KRH20891 | Soybean | nucleus | 39.3 | 32.51 |
| CDY32142 | Canola | mitochondrion, nucleus | 47.26 | 32.09 |
| CDX95019 | Canola | cytosol, mitochondrion, nucleus | 48.26 | 29.66 |
| KRH20893 | Soybean | nucleus | 38.31 | 28.84 |
| OQU83181 | Sorghum | nucleus | 18.41 | 21.64 |
| EES15819 | Sorghum | nucleus | 22.39 | 11.11 |
| EES14613 | Sorghum | nucleus | 23.38 | 10.2 |
| EES16679 | Sorghum | nucleus | 20.4 | 8.84 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.5.51.3 | EntrezGene:8067022 | UniProt:C5YJA9 | InterPro:CBFA_NFYB_domain | EnsemblPlants:EES15444 |
| ProteinID:EES15444 | ProteinID:EES15444.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046982 | InterPro:Histone-fold | InterPro:IPR009072 |
| PFAM:PF00808 | PANTHER:PTHR10252 | PANTHER:PTHR10252:SF46 | EnsemblPlantsGene:SORBI_3007G219500 | SUPFAM:SSF47113 | UniParc:UPI0001A87BB3 |
| RefSeq:XP_002445949.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:-:64760094..64761344
Molecular Weight (calculated)
21607.8 Da
IEP (calculated)
5.609
GRAVY (calculated)
-0.320
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPKSTTPPP PPVMGAPVAY PPPPGAAYPA GPYAHAPAAA LYPPPPPPPA PPTSQQGAAA AQQLQLFWAE QYREIEATTD FKNHNLPLAR IKKIMKADED
101: VRMIAAEAPV VFARACEMFI LELTHRGWAH AEENKRRTLQ KSDIAAAVAR TEVFDFLVDI VPRDEAKEAD SAAAMGPAGI PHPAAGLPAT DPMGYYYVQP
201: Q
101: VRMIAAEAPV VFARACEMFI LELTHRGWAH AEENKRRTLQ KSDIAAAVAR TEVFDFLVDI VPRDEAKEAD SAAAMGPAGI PHPAAGLPAT DPMGYYYVQP
201: Q
001: MEQSEEGQQQ QQQGVMDYVP PHAYQSGPVN AASHMAFQQA HHFHHHHQQQ QQQQLQMFWA NQMQEIEHTT DFKNHTLPLA RIKKIMKADE DVRMISAEAP
101: VIFAKACEMF ILELTLRAWI HTEENKRRTL QKNDIAAAIS RTDVFDFLVD IIPRDELKEE GLGVTKGTIP SVVGSPPYYY LQQQGMMQHW PQEQHPDES
101: VIFAKACEMF ILELTLRAWI HTEENKRRTL QKNDIAAAIS RTDVFDFLVD IIPRDELKEE GLGVTKGTIP SVVGSPPYYY LQQQGMMQHW PQEQHPDES
Arabidopsis Description
NFYC2Nuclear transcription factor Y subunit C-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LCG7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.