Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES15444 | Sorghum | nucleus | 79.7 | 80.1 |
| Zm00001d031310_P001 | Maize | nucleus | 79.21 | 80.0 |
| Zm00001d020874_P001 | Maize | extracellular | 73.27 | 74.0 |
| TraesCS7D01G237100.1 | Wheat | nucleus | 72.77 | 73.87 |
| TraesCS7A01G239500.1 | Wheat | nucleus | 72.28 | 73.37 |
| TraesCS7B01G135000.1 | Wheat | nucleus | 72.28 | 73.37 |
| HORVU7Hr1G048760.3 | Barley | plastid | 72.28 | 56.15 |
| GSMUA_Achr4P03920_001 | Banana | nucleus | 34.65 | 51.47 |
| GSMUA_Achr3P11990_001 | Banana | nucleus | 37.13 | 47.17 |
| CDX93525 | Canola | nucleus | 49.51 | 45.45 |
| GSMUA_Achr4P13170_001 | Banana | nucleus | 32.67 | 45.21 |
| Bra018589.1-P | Field mustard | nucleus | 49.01 | 45.0 |
| AT1G54830.3 | Thale cress | nucleus | 47.52 | 44.24 |
| Bra030749.1-P | Field mustard | nucleus | 47.52 | 44.04 |
| KRH68581 | Soybean | cytoskeleton, cytosol, nucleus, plastid | 50.99 | 43.46 |
| CDY06341 | Canola | nucleus | 49.01 | 43.42 |
| Bra031651.1-P | Field mustard | nucleus | 49.01 | 43.42 |
| AT1G08970.4 | Thale cress | nucleus | 49.01 | 42.86 |
| Zm00001d046967_P001 | Maize | nucleus | 51.49 | 41.94 |
| Zm00001d026648_P001 | Maize | mitochondrion | 25.74 | 40.94 |
| Zm00001d036648_P001 | Maize | extracellular | 49.51 | 40.82 |
| Zm00001d028432_P001 | Maize | nucleus | 49.01 | 40.41 |
| CDY31119 | Canola | nucleus | 38.12 | 40.31 |
| Zm00001d024230_P001 | Maize | nucleus, plastid | 50.0 | 40.24 |
| PGSC0003DMT400023211 | Potato | nucleus | 50.99 | 40.23 |
| Solyc01g079870.2.1 | Tomato | nucleus | 50.99 | 39.92 |
| KRG96853 | Soybean | nucleus | 50.99 | 39.92 |
| KRH43409 | Soybean | nucleus | 40.1 | 39.51 |
| CDY22654 | Canola | cytosol | 49.51 | 39.37 |
| VIT_05s0020g02790.t01 | Wine grape | nucleus | 50.49 | 38.93 |
| PGSC0003DMT400008660 | Potato | nucleus | 48.02 | 38.49 |
| KRH33966 | Soybean | nucleus | 50.0 | 38.26 |
| KRG92828 | Soybean | nucleus | 49.51 | 38.02 |
| VIT_14s0128g00250.t01 | Wine grape | nucleus | 49.51 | 38.02 |
| KRH20896 | Soybean | nucleus | 35.15 | 36.98 |
| GSMUA_Achr1P19420_001 | Banana | nucleus | 35.64 | 36.92 |
| Zm00001d005993_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 50.0 | 36.2 |
| KRH20891 | Soybean | nucleus | 39.11 | 32.51 |
| CDY32142 | Canola | mitochondrion, nucleus | 47.52 | 32.43 |
| CDX95019 | Canola | cytosol, mitochondrion, nucleus | 48.51 | 29.97 |
| KRH20893 | Soybean | nucleus | 38.12 | 28.84 |
| Zm00001d023466_P001 | Maize | cytosol, mitochondrion, nucleus | 19.31 | 8.88 |
Protein Annotations
| Gene3D:1.10.20.10 | EntrezGene:100277570 | MapMan:15.5.51.3 | ProteinID:AIB04498.1 | ProteinID:AQK58161.1 | InterPro:CBFA_NFYB_domain |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0046982 | InterPro:Histone-fold | InterPro:IPR009072 | UniProt:K7V395 | PFAM:PF00808 |
| PANTHER:PTHR10252 | PANTHER:PTHR10252:SF46 | SUPFAM:SSF47113 | UniParc:UPI000220ED93 | EnsemblPlantsGene:Zm00001d052838 | EnsemblPlants:Zm00001d052838_P001 |
| EnsemblPlants:Zm00001d052838_T001 | SEG:seg | : | : | : | : |
Description
CCAAT-HAP5-transcription factor 514Nuclear transcription factor Y subunit C-9
Coordinates
chr4:+:202307193..202307801
Molecular Weight (calculated)
21531.5 Da
IEP (calculated)
5.863
GRAVY (calculated)
-0.209
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPNSSIPPP VMGAAVAYPP AAGAAYSAGP YAHAHAALGA LYPPPPAPGP PSSHQGGAAA AQLQLFWAEQ YREIEATTDF KNHNLPLARI KKIMKADEDV
101: RMIAAEAPVV FARACEMFIL ELTHRGWAHA EENKRRTLQK SDIAAAVART EVFDFLVDIV PRDEPRDADP AAAAMGAAAP GIPQHPAAAD PTTMGYYYVQ
201: PQ
101: RMIAAEAPVV FARACEMFIL ELTHRGWAHA EENKRRTLQK SDIAAAVART EVFDFLVDIV PRDEPRDADP AAAAMGAAAP GIPQHPAAAD PTTMGYYYVQ
201: PQ
001: MEQSEEGQQQ QQQGVMDYVP PHAYQSGPVN AASHMAFQQA HHFHHHHQQQ QQQQLQMFWA NQMQEIEHTT DFKNHTLPLA RIKKIMKADE DVRMISAEAP
101: VIFAKACEMF ILELTLRAWI HTEENKRRTL QKNDIAAAIS RTDVFDFLVD IIPRDELKEE GLGVTKGTIP SVVGSPPYYY LQQQGMMQHW PQEQHPDES
101: VIFAKACEMF ILELTLRAWI HTEENKRRTL QKNDIAAAIS RTDVFDFLVD IIPRDELKEE GLGVTKGTIP SVVGSPPYYY LQQQGMMQHW PQEQHPDES
Arabidopsis Description
NFYC2Nuclear transcription factor Y subunit C-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LCG7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.