Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH20893 | Soybean | nucleus | 67.49 | 61.42 |
| KRH43409 | Soybean | nucleus | 49.38 | 58.54 |
| Os09t0480700-01 | Rice | nucleus | 30.04 | 43.45 |
| KRH20896 | Soybean | nucleus | 34.16 | 43.23 |
| GSMUA_Achr4P03920_001 | Banana | nucleus | 23.46 | 41.91 |
| KRH68581 | Soybean | cytoskeleton, cytosol, nucleus, plastid | 39.09 | 40.08 |
| KRH22187 | Soybean | mitochondrion | 20.16 | 39.84 |
| KRH27143 | Soybean | mitochondrion | 20.16 | 39.84 |
| Zm00001d020874_P001 | Maize | extracellular | 32.51 | 39.5 |
| TraesCS5D01G265000.1 | Wheat | nucleus | 32.92 | 39.41 |
| EES15444 | Sorghum | nucleus | 32.51 | 39.3 |
| TraesCS7D01G237100.1 | Wheat | nucleus | 32.1 | 39.2 |
| TraesCS7A01G239500.1 | Wheat | nucleus | 32.1 | 39.2 |
| Zm00001d052838_P001 | Maize | nucleus | 32.51 | 39.11 |
| EER96945 | Sorghum | nucleus | 32.51 | 39.11 |
| TraesCS5B01G255900.1 | Wheat | nucleus | 32.51 | 38.92 |
| TraesCS5A01G256500.1 | Wheat | nucleus | 32.51 | 38.92 |
| TraesCS7B01G135000.1 | Wheat | nucleus | 31.69 | 38.69 |
| KRH54177 | Soybean | nucleus | 36.21 | 38.43 |
| KRH63772 | Soybean | nucleus | 35.39 | 38.22 |
| KRH13746 | Soybean | nucleus | 41.98 | 38.06 |
| Os08t0496500-01 | Rice | nucleus | 32.1 | 38.05 |
| GSMUA_Achr4P13170_001 | Banana | nucleus | 22.63 | 37.67 |
| KRH43702 | Soybean | nucleus | 41.98 | 37.64 |
| Zm00001d031310_P001 | Maize | nucleus | 30.86 | 37.5 |
| KRG96853 | Soybean | nucleus | 39.09 | 36.82 |
| GSMUA_Achr3P11990_001 | Banana | nucleus | 23.87 | 36.48 |
| KRH33966 | Soybean | nucleus | 39.09 | 35.98 |
| KRG92828 | Soybean | nucleus | 37.86 | 34.98 |
| GSMUA_Achr1P19420_001 | Banana | nucleus | 24.69 | 30.77 |
| HORVU7Hr1G048760.3 | Barley | plastid | 32.1 | 30.0 |
| KRH70416 | Soybean | cytosol | 14.81 | 24.83 |
| Zm00001d005993_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 27.98 | 24.37 |
| GSMUA_Achr9P11550_001 | Banana | cytosol, nucleus, plasma membrane | 33.74 | 12.02 |
Protein Annotations
| Gene3D:1.10.20.10 | EntrezGene:100807046 | MapMan:15.5.51.3 | EMBL:ACUP02008324 | InterPro:CBFA_NFYB_domain | EnsemblPlantsGene:GLYMA_13G207500 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0046982 | InterPro:Histone-fold | UniProt:I1M133 | InterPro:IPR009072 | EnsemblPlants:KRH20891 |
| ProteinID:KRH20891 | ProteinID:KRH20891.1 | ProteinID:KRH20892.1 | PFAM:PF00808 | PANTHER:PTHR10252 | PANTHER:PTHR10252:SF39 |
| SUPFAM:SSF47113 | UniParc:UPI00023CFDB8 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:32101935..32104489
Molecular Weight (calculated)
27210.5 Da
IEP (calculated)
7.271
GRAVY (calculated)
-0.576
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQNQHDRLA QEAQYQSNPM MAPTILPTQT YGHSLSSSYP RLHPYDPQAM YQLRQEPLQQ QLTNFWAKKR QEIEETTSFK THSLPLARIK KIMKGEEGVR
101: MVSAEASVVF AKACEMFMME LTIRASGSAE ENQRKIIKKC DVASAISRTD VFDFLVDIVS GHNKIMEQQG FVGIPRIGTA LTPTENVPYY QMPPHQSLVP
201: GPPYGSSGMV VGMPVHYQNH PGLQTPTMGP TPNPQNSSRD SDS
101: MVSAEASVVF AKACEMFMME LTIRASGSAE ENQRKIIKKC DVASAISRTD VFDFLVDIVS GHNKIMEQQG FVGIPRIGTA LTPTENVPYY QMPPHQSLVP
201: GPPYGSSGMV VGMPVHYQNH PGLQTPTMGP TPNPQNSSRD SDS
001: MDQQGQSSAM NYGSNPYQTN AMTTTPTGSD HPAYHQIHQQ QQQQLTQQLQ SFWETQFKEI EKTTDFKNHS LPLARIKKIM KADEDVRMIS AEAPVVFARA
101: CEMFILELTL RSWNHTEENK RRTLQKNDIA AAVTRTDIFD FLVDIVPRED LRDEVLGGVG AEAATAAGYP YGYLPPGTAP IGNPGMVMGN PGAYPPNPYM
201: GQPMWQQPGP EQQDPDN
101: CEMFILELTL RSWNHTEENK RRTLQKNDIA AAVTRTDIFD FLVDIVPRED LRDEVLGGVG AEAATAAGYP YGYLPPGTAP IGNPGMVMGN PGAYPPNPYM
201: GQPMWQQPGP EQQDPDN
Arabidopsis Description
NFYC3Nuclear transcription factor Y subunit C-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.