Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- cytosol 2
- mitochondrion 3
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH13746 | Soybean | nucleus | 95.2 | 96.27 |
VIT_19s0085g00520.t01 | Wine grape | cytosol | 79.34 | 79.93 |
AT1G56170.2 | Thale cress | nucleus | 55.35 | 75.38 |
Bra003334.1-P | Field mustard | nucleus | 49.08 | 72.28 |
CDX67737 | Canola | nucleus | 47.97 | 69.15 |
KXG24590 | Sorghum | nucleus | 57.2 | 61.26 |
Os02t0170500-01 | Rice | nucleus | 58.3 | 61.0 |
Os06t0667100-01 | Rice | cytosol, nucleus, plastid | 56.09 | 60.8 |
Zm00001d046967_P001 | Maize | nucleus | 55.35 | 60.48 |
KRH68581 | Soybean | cytoskeleton, cytosol, nucleus, plastid | 52.77 | 60.34 |
Zm00001d036648_P001 | Maize | extracellular | 54.24 | 60.0 |
TraesCS6D01G147300.1 | Wheat | nucleus | 56.09 | 59.38 |
EER88787 | Sorghum | nucleus | 55.72 | 59.22 |
GSMUA_Achr11P... | Banana | cytosol | 55.35 | 59.06 |
TraesCS6A01G157900.1 | Wheat | nucleus | 55.72 | 58.98 |
HORVU6Hr1G032200.1 | Barley | nucleus | 56.09 | 58.46 |
KRG96853 | Soybean | nucleus | 55.35 | 58.14 |
Zm00001d024230_P001 | Maize | nucleus, plastid | 53.51 | 57.77 |
TraesCS7D01G463100.1 | Wheat | nucleus | 52.77 | 55.64 |
KRH54177 | Soybean | nucleus | 46.86 | 55.46 |
KRG92828 | Soybean | nucleus | 53.51 | 55.13 |
KRH33966 | Soybean | nucleus | 53.51 | 54.92 |
TraesCS7B01G377500.1 | Wheat | nucleus | 51.66 | 54.69 |
KRH63772 | Soybean | nucleus | 45.39 | 54.67 |
TraesCS7A01G475400.1 | Wheat | nucleus | 51.66 | 54.47 |
HORVU7Hr1G108370.1 | Barley | nucleus | 51.29 | 53.46 |
TraesCS6B01G185700.1 | Wheat | cytosol | 56.09 | 52.23 |
KRH43409 | Soybean | nucleus | 36.53 | 48.29 |
TraesCS7D01G462200.1 | Wheat | nucleus | 44.28 | 45.8 |
TraesCS7D01G462100.1 | Wheat | nucleus | 33.21 | 45.69 |
TraesCS7B01G377200.1 | Wheat | nucleus | 40.96 | 44.76 |
KRH22187 | Soybean | mitochondrion | 20.3 | 44.72 |
TraesCS7B01G376500.1 | Wheat | nucleus | 37.27 | 44.3 |
TraesCS7A01G474800.1 | Wheat | nucleus | 38.01 | 44.02 |
TraesCS3D01G102500.1 | Wheat | nucleus | 37.64 | 43.78 |
KRH27143 | Soybean | mitochondrion | 19.56 | 43.09 |
TraesCS7B01G377000.1 | Wheat | nucleus | 36.16 | 42.06 |
KRH20891 | Soybean | nucleus | 37.64 | 41.98 |
KXG24666 | Sorghum | nucleus | 33.95 | 41.07 |
KRH20896 | Soybean | nucleus | 28.41 | 40.1 |
KRH20893 | Soybean | nucleus | 36.16 | 36.7 |
Os08t0206500-00 | Rice | nucleus | 35.42 | 34.04 |
KRH70416 | Soybean | cytosol | 15.13 | 28.28 |
Protein Annotations
Gene3D:1.10.20.10 | EntrezGene:100796987 | MapMan:15.5.51.3 | EMBL:ACUP02004883 | InterPro:CBFA_NFYB_domain | EnsemblPlantsGene:GLYMA_08G165700 |
GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005634 | GO:GO:0046982 | InterPro:Histone-fold | UniProt:I1KTY0 | InterPro:IPR009072 | ProteinID:KRH43701.1 |
EnsemblPlants:KRH43702 | ProteinID:KRH43702 | ProteinID:KRH43702.1 | PFAM:PF00808 | PANTHER:PTHR10252 | PANTHER:PTHR10252:SF71 |
SUPFAM:SSF47113 | UniParc:UPI000152A2EB | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:13064888..13068920
Molecular Weight (calculated)
30427.2 Da
IEP (calculated)
6.650
GRAVY (calculated)
-0.566
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKSEQTQQQ QQQQQHVMGV AAGASQMAYS SHYPTASMVA SGTPAVTAPS PTQAPAAFSS SAHQLAYQQA QHFHHQQQQH QQQQLQMFWS NQMQEIEQTI
101: DFKNHSLPLA RIKKIMKADE DVRMISAEAP VIFAKACEMF ILELTLRSWI HTEENKRRTL QKNDIAAAIS RNDVFDFLVD IIPRDELKEE GLGITKATIP
201: LVGSPADMPY YYVPPQHPVV GPPGMIMGKP IGAEQATLYS TQQPRPPVAF MPWPHTQPLQ QQPPQHQQTD S
101: DFKNHSLPLA RIKKIMKADE DVRMISAEAP VIFAKACEMF ILELTLRSWI HTEENKRRTL QKNDIAAAIS RNDVFDFLVD IIPRDELKEE GLGITKATIP
201: LVGSPADMPY YYVPPQHPVV GPPGMIMGKP IGAEQATLYS TQQPRPPVAF MPWPHTQPLQ QQPPQHQQTD S
001: MDQQDHGQSG AMNYGTNPYQ TNPMSTTAAT VAGGAAQPGQ LAFHQIHQQQ QQQQLAQQLQ AFWENQFKEI EKTTDFKNHS LPLARIKKIM KADEDVRMIS
101: AEAPVVFARA CEMFILELTL RSWNHTEENK RRTLQKNDIA AAVTRTDIFD FLVDIVPRED LRDEVLGSIP RGTVPEAAAA GYPYGYLPAG TAPIGNPGMV
201: MGNPGGAYPP NPYMGQPMWQ QQAPDQPDQE N
101: AEAPVVFARA CEMFILELTL RSWNHTEENK RRTLQKNDIA AAVTRTDIFD FLVDIVPRED LRDEVLGSIP RGTVPEAAAA GYPYGYLPAG TAPIGNPGMV
201: MGNPGGAYPP NPYMGQPMWQ QQAPDQPDQE N
Arabidopsis Description
NFYC9Nuclear transcription factor Y subunit C-9 [Source:UniProtKB/Swiss-Prot;Acc:Q8L4B2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.