Factsheet for TraesCS7B01G377000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G102500.1	Wheat	nucleus	91.85	91.85
TraesCS7D01G462100.1	Wheat	nucleus	74.68	88.32
TraesCS7A01G474800.1	Wheat	nucleus	87.55	87.18
TraesCS7B01G376500.1	Wheat	nucleus	83.69	85.53
TraesCS7B01G377200.1	Wheat	nucleus	58.37	54.84
Os06t0667100-01	Rice	cytosol, nucleus, plastid	51.07	47.6
EER88787	Sorghum	nucleus	51.93	47.45
TraesCS7B01G377500.1	Wheat	nucleus	51.93	47.27
Zm00001d046967_P001	Maize	nucleus	49.79	46.77
Zm00001d036648_P001	Maize	extracellular	47.64	45.31
Bra003334.1-P	Field mustard	nucleus	34.76	44.02
AT1G56170.2	Thale cress	nucleus	37.34	43.72
CDX67737	Canola	nucleus	33.91	42.02
TraesCS7B01G135000.1	Wheat	nucleus	35.19	41.21
TraesCS5B01G255900.1	Wheat	nucleus	35.19	40.39
TraesCS6B01G185700.1	Wheat	cytosol	50.21	40.21
GSMUA_Achr11P...	Banana	cytosol	42.92	39.37
VIT_19s0085g00520.t01	Wine grape	cytosol	42.92	37.17
TraesCS4B01G223000.1	Wheat	nucleus	38.2	36.78
KRH13746	Soybean	nucleus	41.63	36.19
KRH43702	Soybean	nucleus	42.06	36.16
GSMUA_Achr5P26790_001	Banana	cytosol	32.19	33.48
GSMUA_Achr3P23600_001	Banana	cytosol, mitochondrion, nucleus, plastid	34.76	31.4
TraesCS1B01G366800.1	Wheat	mitochondrion	18.45	31.16
GSMUA_Achr11P...	Banana	cytosol	39.48	29.97
TraesCS1B01G365500.1	Wheat	mitochondrion	17.17	28.37
TraesCS7B01G248300.1	Wheat	cytosol	20.6	11.65

Protein Annotations

EnsemblPlants:TraesCS7B01G377000.1	EnsemblPlantsGene:TraesCS7B01G377000	Gene3D:1.10.20.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046982	InterPro:CBFA_NFYB_domain	InterPro:Histone-fold	InterPro:IPR009072	PANTHER:PTHR10252	PANTHER:PTHR10252:SF74
PFAM:PF00808	SEG:seg	SUPFAM:SSF47113	MapMan:15.5.51.3	:	:

Description

No Description!

Coordinates

chr7B:-:641741340..641742041

Molecular Weight (calculated)

26356.0 Da

IEP (calculated)

4.757

GRAVY (calculated)

-0.734

Length

233 amino acids

Sequence
(BLAST)

001: MVPTSQPQPA MGDVSPAGSQ PTQLFPGYPA QLSAQEQLMY EQSREYQQQL QQQQQRQLQQ FWAEQRSEIE QTTDIKNHLL PPTRIRKIMR ADQDVHMISA
101: EAPALFAKAC EMFTLEMTKR SWMVTKEDKR GVLQRSDVAA AVARTDIYDF LLDLFTSEET KQGVLLPRTG QQPMGAPTGA YPYCYAPQQQ VAGASMAYGG
201: PSTYVWQEPQ VQEQGHPSST YVWQEPPQQQ EGP

Best Arabidopsis Sequence Match ( AT1G54830.1 )
(BLAST)

001: MDQQGQSSAM NYGSNPYQTN AMTTTPTGSD HPAYHQIHQQ QQQQLTQQLQ SFWETQFKEI EKTTDFKNHS LPLARIKKIM KADEDVRMIS AEAPVVFARA
101: CEMFILELTL RSWNHTEENK RRTLQKNDIA AAVTRTDIFD FLVDIVPRED LRDEVLGGVG AEAATAAGYP YGYLPPGTAP IGNPGMVMGN PGAYPPNPYM
201: GQPMWQQPGP EQQDPDN

Arabidopsis Description

NFYC3Nuclear transcription factor Y subunit C-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVL3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.