Factsheet for TraesCS7B01G377500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G463100.1	Wheat	nucleus	94.14	93.77
TraesCS7A01G475400.1	Wheat	nucleus	92.97	92.61
HORVU7Hr1G108370.1	Barley	nucleus	79.69	78.46
Os06t0667100-01	Rice	cytosol, nucleus, plastid	75.78	77.6
EER88787	Sorghum	nucleus	72.66	72.94
Zm00001d046967_P001	Maize	nucleus	69.53	71.77
Zm00001d036648_P001	Maize	extracellular	67.19	70.2
TraesCS6B01G185700.1	Wheat	cytosol	70.7	62.2
Bra003334.1-P	Field mustard	nucleus	44.53	61.96
AT1G56170.2	Thale cress	nucleus	47.27	60.8
CDX67737	Canola	nucleus	43.75	59.57
TraesCS7B01G135000.1	Wheat	nucleus	46.09	59.3
TraesCS7B01G377200.1	Wheat	nucleus	54.69	56.45
TraesCS5B01G255900.1	Wheat	nucleus	43.75	55.17
GSMUA_Achr11P...	Banana	cytosol	53.12	53.54
VIT_19s0085g00520.t01	Wine grape	cytosol	55.86	53.16
TraesCS7B01G376500.1	Wheat	nucleus	47.27	53.07
KRH13746	Soybean	nucleus	54.69	52.24
TraesCS7B01G377000.1	Wheat	nucleus	47.27	51.93
KRH43702	Soybean	nucleus	54.69	51.66
TraesCS4B01G223000.1	Wheat	nucleus	43.75	46.28
GSMUA_Achr5P26790_001	Banana	cytosol	39.45	45.09
GSMUA_Achr11P...	Banana	cytosol	48.05	40.07
TraesCS1B01G365500.1	Wheat	mitochondrion	21.88	39.72
GSMUA_Achr3P23600_001	Banana	cytosol, mitochondrion, nucleus, plastid	38.28	37.98
TraesCS1B01G366800.1	Wheat	mitochondrion	20.31	37.68
TraesCS7B01G248300.1	Wheat	cytosol	19.53	12.14

Protein Annotations

EnsemblPlants:TraesCS7B01G377500.1	EnsemblPlantsGene:TraesCS7B01G377500	Gene3D:1.10.20.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046982	InterPro:CBFA_NFYB_domain	InterPro:Histone-fold	InterPro:IPR009072	ncoils:Coil	PANTHER:PTHR10252
PANTHER:PTHR10252:SF74	PFAM:PF00808	SEG:seg	SUPFAM:SSF47113	MapMan:15.5.51.3	:

Description

No Description!

Coordinates

chr7B:+:642261196..642261966

Molecular Weight (calculated)

28545.6 Da

IEP (calculated)

4.796

GRAVY (calculated)

-0.623

Length

256 amino acids

Sequence
(BLAST)

001: MEPSSQPQPA TGDVVAGGSQ VYPASAYPRA ATIAVAPGII PAGSQPASPF PANPAQLNAQ NQLIYEQAQQ FQQQLQQQQQ RQLQQFWAER LSEVDQATDF
101: KNHTLPLARI KKIMKADEDV RMISAEAPVV FAKACEIFIL ELTLRSWMHT EENKRRTLQK NDIAAAISRT DVYDFLVDII PRDEMREEGV GLPRAGQPPL
201: LGDTPYPYYY PQQVPGAVMG YGGQQVQQGH LPYVWQDPQE QQQQGPHAEQ HQSESG

Best Arabidopsis Sequence Match ( AT1G08970.2 )
(BLAST)

001: MDQQDHGQSG AMNYGTNPYQ TNPMSTTAAT VAGGAAQPGQ LAFHQIHQQQ QQQQLAQQLQ AFWENQFKEI EKTTDFKNHS LPLARIKKIM KADEDVRMIS
101: AEAPVVFARA CEMFILELTL RSWNHTEENK RRTLQKNDIA AAVTRTDIFD FLVDIVPRED LRDEVLGSIP RGTVPEAAAA GYPYGYLPAG TAPIGNPGMV
201: MGNPGGAYPP NPYMGQPMWQ QQAPDQPDQE N

Arabidopsis Description

NFYC9Nuclear transcription factor Y subunit C-9 [Source:UniProtKB/Swiss-Prot;Acc:Q8L4B2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.