Factsheet for TraesCS7A01G475400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G463100.1	Wheat	nucleus	96.11	96.11
TraesCS7B01G377500.1	Wheat	nucleus	92.61	92.97
HORVU7Hr1G108370.1	Barley	nucleus	80.16	79.23
Os06t0667100-01	Rice	cytosol, nucleus, plastid	76.26	78.4
EER88787	Sorghum	nucleus	73.54	74.12
Zm00001d046967_P001	Maize	nucleus	70.43	72.98
Zm00001d036648_P001	Maize	extracellular	68.09	71.43
TraesCS6A01G157900.1	Wheat	nucleus	70.82	71.09
Bra003334.1-P	Field mustard	nucleus	43.19	60.33
AT1G56170.2	Thale cress	nucleus	46.69	60.3
TraesCS7A01G239500.1	Wheat	nucleus	45.91	59.3
CDX67737	Canola	nucleus	42.41	57.98
TraesCS5A01G256500.1	Wheat	nucleus	43.97	55.66
GSMUA_Achr11P...	Banana	cytosol	53.31	53.94
TraesCS7A01G474800.1	Wheat	nucleus	48.25	52.99
VIT_19s0085g00520.t01	Wine grape	cytosol	55.25	52.79
KRH13746	Soybean	nucleus	54.47	52.24
KRH43702	Soybean	nucleus	54.47	51.66
TraesCS4A01G081000.1	Wheat	nucleus	45.14	48.13
GSMUA_Achr5P26790_001	Banana	cytosol	40.86	46.88
GSMUA_Achr11P...	Banana	cytosol	47.47	39.74
GSMUA_Achr3P23600_001	Banana	cytosol, mitochondrion, nucleus, plastid	38.91	38.76
TraesCS1A01G354900.1	Wheat	mitochondrion	20.23	38.52
TraesCS1A01G355900.1	Wheat	mitochondrion	21.01	38.3
TraesCS7A01G336700.1	Wheat	cytosol	18.68	11.59

Protein Annotations

EnsemblPlants:TraesCS7A01G475400.1	EnsemblPlantsGene:TraesCS7A01G475400	Gene3D:1.10.20.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046982	InterPro:CBFA_NFYB_domain	InterPro:Histone-fold	InterPro:IPR009072	PANTHER:PTHR10252	PANTHER:PTHR10252:SF74
PFAM:PF00808	SEG:seg	SUPFAM:SSF47113	MapMan:15.5.51.3	:	:

Description

No Description!

Coordinates

chr7A:+:670536678..670537451

Molecular Weight (calculated)

28513.5 Da

IEP (calculated)

4.793

GRAVY (calculated)

-0.586

Length

257 amino acids

Sequence
(BLAST)

001: MEPSSQPQPA TGDVVAGGSQ VYPASSYPPA ATIAIAPGII PAGSQPAPPF PANSAQLNAQ NQLIYEQAQQ FHQQLQQQQQ RQLQQFWAER LSEVDQATDF
101: KNHTLPLARI KKIMKADEDV RMISAEAPVV FAKACEIFIL ELTLRSWMHT EENKRRTLQK NDIAAAITRT DVYDFLVDII PRDEMREEGV GLPRAGQLPL
201: LGAPADASYP YYYPQQVPGA VMGYGGHQGH LPYVWQDPQE QQQQQGHPGE QQQSESG

Best Arabidopsis Sequence Match ( AT1G56170.1 )
(BLAST)

001: MEQSEEGQQQ QQQGVMDYVP PHAYQSGPVN AASHMAFQQA HHFHHHHQQQ QQQQLQMFWA NQMQEIEHTT DFKNHTLPLA RIKKIMKADE DVRMISAEAP
101: VIFAKACEMF ILELTLRAWI HTEENKRRTL QKNDIAAAIS RTDVFDFLVD IIPRDELKEE GLGVTKGTIP SVVGSPPYYY LQQQGMMQHW PQEQHPDES

Arabidopsis Description

NFYC2Nuclear transcription factor Y subunit C-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LCG7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.