Factsheet for TraesCS7D01G463100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G475400.1	Wheat	nucleus	96.11	96.11
TraesCS7B01G377500.1	Wheat	nucleus	93.77	94.14
HORVU7Hr1G108370.1	Barley	nucleus	81.32	80.38
Os06t0667100-01	Rice	cytosol, nucleus, plastid	77.43	79.6
EER88787	Sorghum	nucleus	75.1	75.69
Zm00001d046967_P001	Maize	nucleus	71.98	74.6
Zm00001d036648_P001	Maize	extracellular	69.65	73.06
TraesCS6D01G147300.1	Wheat	nucleus	72.76	73.05
Bra003334.1-P	Field mustard	nucleus	45.14	63.04
AT1G56170.2	Thale cress	nucleus	47.47	61.31
CDX67737	Canola	nucleus	44.36	60.64
TraesCS7D01G237100.1	Wheat	nucleus	46.69	60.3
TraesCS7D01G462200.1	Wheat	nucleus	59.53	58.4
TraesCS5D01G265000.1	Wheat	nucleus	44.75	56.65
TraesCS3D01G102500.1	Wheat	nucleus	50.97	56.22
GSMUA_Achr11P...	Banana	cytosol	54.47	55.12
VIT_19s0085g00520.t01	Wine grape	cytosol	56.42	53.9
KRH13746	Soybean	nucleus	55.64	53.36
TraesCS7D01G462100.1	Wheat	nucleus	40.47	52.79
KRH43702	Soybean	nucleus	55.64	52.77
TraesCS4D01G223400.1	Wheat	nucleus	45.14	47.93
GSMUA_Achr5P26790_001	Banana	cytosol	41.63	47.77
GSMUA_Achr11P...	Banana	cytosol	49.03	41.04
GSMUA_Achr3P23600_001	Banana	cytosol, mitochondrion, nucleus, plastid	39.69	39.53
TraesCS1D01G354400.1	Wheat	mitochondrion	21.4	39.01
TraesCS1D01G355600.1	Wheat	mitochondrion	20.23	38.52
TraesCS7D01G344400.1	Wheat	cytosol	18.68	11.68

Protein Annotations

EnsemblPlants:TraesCS7D01G463100.1	EnsemblPlantsGene:TraesCS7D01G463100	Gene3D:1.10.20.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046982	InterPro:CBFA_NFYB_domain	InterPro:Histone-fold	InterPro:IPR009072	PANTHER:PTHR10252	PANTHER:PTHR10252:SF74
PFAM:PF00808	SEG:seg	SUPFAM:SSF47113	MapMan:15.5.51.3	:	:

Description

No Description!

Coordinates

chr7D:+:578465146..578465919

Molecular Weight (calculated)

28482.5 Da

IEP (calculated)

4.793

GRAVY (calculated)

-0.578

Length

257 amino acids

Sequence
(BLAST)

001: MEPSSQPQPA TGDVVAGGSQ VYPASAYPPA ATIAVAPGII PAASQPASPF PANPAQLTAQ NQLIYEQAQQ FHQQLQQQQQ RQLQQFWAER LSEIDQATDF
101: KNHTLPLARI KKIMKADEDV RMISAEAPVV FAKACEIFIL ELTLRSWMHT EENKRRTLQK NDIAAAITRT DVYDFLVDII PRDEMREEGV GLPRAGQPPL
201: LGAPADASYP YYYPQQVPGA VMGYGGQQGH LPYVWQDPQE QQQHQGHPGE QQQSESG

Best Arabidopsis Sequence Match ( AT1G56170.1 )
(BLAST)

001: MEQSEEGQQQ QQQGVMDYVP PHAYQSGPVN AASHMAFQQA HHFHHHHQQQ QQQQLQMFWA NQMQEIEHTT DFKNHTLPLA RIKKIMKADE DVRMISAEAP
101: VIFAKACEMF ILELTLRAWI HTEENKRRTL QKNDIAAAIS RTDVFDFLVD IIPRDELKEE GLGVTKGTIP SVVGSPPYYY LQQQGMMQHW PQEQHPDES

Arabidopsis Description

NFYC2Nuclear transcription factor Y subunit C-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LCG7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.