Factsheet for TraesCS7D01G344400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G248300.1	Wheat	cytosol	96.11	95.87
TraesCS7A01G336700.1	Wheat	cytosol	92.21	91.55
HORVU7Hr1G082930.1	Barley	nucleus	83.21	84.03
OQU83181	Sorghum	nucleus	15.09	36.26
PGSC0003DMT400090065	Potato	nucleus	11.19	31.08
Solyc03g110840.1.1	Tomato	nucleus	11.44	29.01
Os10t0191900-00	Rice	nucleus	23.36	28.66
Solyc11g016920.1.1	Tomato	cytosol	9.49	28.26
Os05t0304800-01	Rice	nucleus	22.38	28.13
Solyc02g021330.1.1	Tomato	cytosol	10.46	28.1
PGSC0003DMT400039471	Potato	nucleus	10.46	27.92
TraesCS5D01G265000.1	Wheat	nucleus	13.38	27.09
TraesCS7D01G237100.1	Wheat	nucleus	12.65	26.13
Solyc03g110850.1.1	Tomato	cytosol	10.22	25.77
TraesCS7D01G462100.1	Wheat	nucleus	11.92	24.87
TraesCS1D01G355600.1	Wheat	mitochondrion	7.79	23.7
TraesCS1D01G354400.1	Wheat	mitochondrion	7.54	21.99
TraesCS3D01G102500.1	Wheat	nucleus	12.17	21.46
TraesCS4D01G223400.1	Wheat	nucleus	12.41	21.07
Solyc11g016910.1.1	Tomato	nucleus	4.62	20.43
TraesCS6D01G147300.1	Wheat	nucleus	12.41	19.92
TraesCS7D01G463100.1	Wheat	nucleus	11.68	18.68
KRH70416	Soybean	cytosol	6.57	18.62
TraesCS7D01G462200.1	Wheat	nucleus	11.19	17.56

Protein Annotations

EnsemblPlants:TraesCS7D01G344400.1	EnsemblPlantsGene:TraesCS7D01G344400	Gene3D:1.10.20.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046982	InterPro:CBFA_NFYB_domain	InterPro:Histone-fold	InterPro:IPR009072	PANTHER:PTHR10252	PANTHER:PTHR10252:SF43
PFAM:PF00808	SEG:seg	SUPFAM:SSF47113	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr7D:-:441981211..441982446

Molecular Weight (calculated)

44211.1 Da

IEP (calculated)

4.274

GRAVY (calculated)

-0.273

Length

411 amino acids

Sequence
(BLAST)

001: MGTEQGKEGT GAGEGRVEVR TGPRPALPAP QQRAVDGFWR ERQEEMEATV DFNDRILPMA RLKRLIRAEE DGMMIAADTP AYLAKLCELF VQELAVRAWA
101: CAQSHRRRII LESDIAEAAA YTESYDFLAT VLLEHQREAR LAGRATPTTV PVSAARARLI TRKRHMPDPN PPRPVHGVRR IRPRALPIPP PSDVRYVPVP
201: FPFPSAPIGA TATAEGLMIL PPINHATTER VFFLDRNSGT DFAGENSAAE TMASPPRPAG PAGAVALPTV HPAAYYLCAY PVTNDVEAFA VGNTDPDVIP
301: PEIVVGDVAI PPEIIEGNVA DGNGDGGQQQ QQSENLGGNG ESVVVPQSND VQEDGADGMF LEEILMDEDL MFPDAELFPL VGAAPGPEDF IVDQDVLDDV
401: FANPSSSASS D

Best Arabidopsis Sequence Match ( AT1G56170.1 )
(BLAST)

001: MEQSEEGQQQ QQQGVMDYVP PHAYQSGPVN AASHMAFQQA HHFHHHHQQQ QQQQLQMFWA NQMQEIEHTT DFKNHTLPLA RIKKIMKADE DVRMISAEAP
101: VIFAKACEMF ILELTLRAWI HTEENKRRTL QKNDIAAAIS RTDVFDFLVD IIPRDELKEE GLGVTKGTIP SVVGSPPYYY LQQQGMMQHW PQEQHPDES

Arabidopsis Description

NFYC2Nuclear transcription factor Y subunit C-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LCG7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.