Factsheet for HORVU7Hr1G082930.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G344400.1	Wheat	cytosol	84.03	83.21
TraesCS7A01G336700.1	Wheat	cytosol	83.54	82.13
TraesCS7B01G248300.1	Wheat	cytosol	82.06	81.07
OQU83181	Sorghum	nucleus	14.5	34.5
PGSC0003DMT400090065	Potato	nucleus	12.04	33.11
Solyc03g110840.1.1	Tomato	nucleus	12.29	30.86
PGSC0003DMT400039471	Potato	nucleus	11.55	30.52
Solyc11g016920.1.1	Tomato	cytosol	10.07	29.71
Solyc02g021330.1.1	Tomato	cytosol	11.06	29.41
Os05t0304800-01	Rice	nucleus	22.6	28.13
Solyc03g110850.1.1	Tomato	cytosol	11.06	27.61
Os10t0191900-00	Rice	nucleus	22.36	27.16
HORVU1Hr1G081010.1	Barley	mitochondrion	7.86	23.53
HORVU4Hr1G062890.2	Barley	nucleus	13.27	22.41
Solyc11g016910.1.1	Tomato	nucleus	4.91	21.51
HORVU6Hr1G032200.1	Barley	nucleus	13.27	20.77
HORVU7Hr1G048760.3	Barley	plastid	12.78	20.0
KRH70416	Soybean	cytosol	6.88	19.31
HORVU7Hr1G108370.1	Barley	nucleus	11.3	17.69

Protein Annotations

EnsemblPlants:HORVU7Hr1G082930.1	EnsemblPlantsGene:HORVU7Hr1G082930	Gene3D:1.10.20.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0046982	InterPro:CBFA_NFYB_domain
InterPro:Histone-fold	InterPro:IPR009072	PANTHER:PTHR10252	PANTHER:PTHR10252:SF43	PFAM:PF00808	SEG:seg
SUPFAM:SSF47113	UniParc:UPI000B46CA8D	UniProt:A0A287X4C3	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr7H:-:498937489..498938712

Molecular Weight (calculated)

43831.6 Da

IEP (calculated)

4.360

GRAVY (calculated)

-0.274

Length

407 amino acids

Sequence
(BLAST)

001: MGTEKGEEGT GEERVEVRTG PRPALPAPQQ RAVDEFWRKQ QEEMEATVDF NDRILPMARL KRVIRAEEDG MMIAADTPAY LAKLCELFVQ ELALRAWACA
101: QSHHRRIILD SDIAEAVAYT ESYDFLTTLL LEHQREARLV GRATATPATA PATAARLITR KRHMPDPNPP RQVHGVRIIR PRALPITPTP PPLDVRYVPV
201: PFPFPSAPIG ATATAEGLMI LPPINHATTG RAFFLDRNSG TSFEGENSAA ETMASPPQAG PAEALALPSV HPAAYYLCSY PLTNDVEAFA VGNTDPIGIP
301: PEIVEGNVVD GDGDGGQQHH QSANVGGHRE SVVVEVQRSS DVQDAGAGGA GGMFLEEILM DEDLLFPDAE LFPLVGAAPG PDPEDFIVDQ DVLDDVFANP
401: SSSTGSD

Best Arabidopsis Sequence Match ( AT1G54830.1 )
(BLAST)

001: MDQQGQSSAM NYGSNPYQTN AMTTTPTGSD HPAYHQIHQQ QQQQLTQQLQ SFWETQFKEI EKTTDFKNHS LPLARIKKIM KADEDVRMIS AEAPVVFARA
101: CEMFILELTL RSWNHTEENK RRTLQKNDIA AAVTRTDIFD FLVDIVPRED LRDEVLGGVG AEAATAAGYP YGYLPPGTAP IGNPGMVMGN PGAYPPNPYM
201: GQPMWQQPGP EQQDPDN

Arabidopsis Description

NFYC3Nuclear transcription factor Y subunit C-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVL3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.