Factsheet for Os10t0191900-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0304800-01	Rice	nucleus	62.69	64.22
OQU83181	Sorghum	nucleus	18.51	36.26
PGSC0003DMT400090065	Potato	nucleus	12.24	27.7
Solyc02g021330.1.1	Tomato	cytosol	11.64	25.49
Solyc03g110840.1.1	Tomato	nucleus	12.24	25.31
Os04t0683400-00	Rice	mitochondrion	8.96	24.0
TraesCS7A01G336700.1	Wheat	cytosol	29.25	23.67
TraesCS7D01G344400.1	Wheat	cytosol	28.66	23.36
TraesCS7B01G248300.1	Wheat	cytosol	28.66	23.3
Solyc11g016920.1.1	Tomato	cytosol	9.55	23.19
HORVU7Hr1G082930.1	Barley	nucleus	27.16	22.36
KRH70416	Soybean	cytosol	9.55	22.07
Os09t0480700-01	Rice	nucleus	11.04	22.02
PGSC0003DMT400039471	Potato	nucleus	9.85	21.43
Os01t0102400-01	Rice	nucleus	26.87	21.38
Solyc03g110850.1.1	Tomato	cytosol	10.15	20.86
Os01t0580400-01	Rice	nucleus	27.16	20.59
Os02t0170500-01	Rice	nucleus	14.63	18.92
Os06t0667100-01	Rice	cytosol, nucleus, plastid	14.03	18.8
Os03t0251350-00	Rice	nucleus	13.73	18.7
Os08t0496500-01	Rice	nucleus	11.34	18.54
Solyc11g016910.1.1	Tomato	nucleus	4.48	16.13
Os08t0206500-00	Rice	nucleus	10.75	12.77

Protein Annotations

Gene3D:1.10.20.10	MapMan:35.2	EntrezGene:4348238	ProteinID:AAM93459.1	ProteinID:AAP52574.1	ProteinID:BAF26193.1
ProteinID:BAT10195.1	InterPro:CBFA_NFYB_domain	ProteinID:EAZ15549.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0046982	InterPro:Histone-fold
InterPro:IPR009072	EnsemblPlantsGene:Os10g0191900	EnsemblPlants:Os10t0191900-00	PFAM:PF00808	PANTHER:PTHR10252	PANTHER:PTHR10252:SF68
UniProt:Q8LMX6	SUPFAM:SSF47113	UniParc:UPI00000A78A5	RefSeq:XP_015613386.1	:	:

Description

HAP5L SUBUNIT OF CCAAT-BOX BINDING COMPLEXHistone-fold domain containing protein. (Os10t0191900-00)

Coordinates

chr10:+:6404506..6405513

Molecular Weight (calculated)

36910.7 Da

IEP (calculated)

5.107

GRAVY (calculated)

-0.439

Length

335 amino acids

Sequence
(BLAST)

001: MPIPEKDGVE DNQEDDTFSR LQLLAQQRHA MEKFWRMSQE QIEESAGNEE LILPISRVKN IIHAKEGGMM LSADTPAFVT KLCELFVQEL ILRAWVCANS
101: HNREIILGTD IAEAITTTES YHFLANVVHG HQALGSNIPE IGVSAWKRHK LDEMTSLCHP PQAVQVTDLA NHPPNIPVCP PIGQSGTQHT TSTHVLMMQG
201: ESIHKASKEK SPLKEVMVPT NKVGMTNSSY GVPNGGGATS SKVVIDSPKG ETAQVFSSQH ACPSLEDNYV IPIPAGHGDS FRTLDEANIP QLHQEQKNFI
301: SQDAIVGENI PLNESLEKSK HKDEDLLFPD KDLPE

Best Arabidopsis Sequence Match ( AT1G56170.1 )
(BLAST)

001: MEQSEEGQQQ QQQGVMDYVP PHAYQSGPVN AASHMAFQQA HHFHHHHQQQ QQQQLQMFWA NQMQEIEHTT DFKNHTLPLA RIKKIMKADE DVRMISAEAP
101: VIFAKACEMF ILELTLRAWI HTEENKRRTL QKNDIAAAIS RTDVFDFLVD IIPRDELKEE GLGVTKGTIP SVVGSPPYYY LQQQGMMQHW PQEQHPDES

Arabidopsis Description

NFYC2Nuclear transcription factor Y subunit C-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LCG7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.