Factsheet for Os01t0580400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0102400-01	Rice	nucleus	87.1	91.45
Os09t0480700-01	Rice	nucleus	11.76	30.95
PGSC0003DMT400039471	Potato	nucleus	10.63	30.52
EES15819	Sorghum	nucleus	27.38	29.88
PGSC0003DMT400090065	Potato	nucleus	9.95	29.73
EES14613	Sorghum	nucleus	30.32	29.07
Solyc11g016920.1.1	Tomato	cytosol	9.05	28.99
Os05t0304800-01	Rice	nucleus	20.59	27.83
Zm00001d023466_P001	Maize	cytosol, mitochondrion, nucleus	27.38	27.56
Os04t0683400-00	Rice	mitochondrion	7.69	27.2
Os10t0191900-00	Rice	nucleus	20.59	27.16
EES16679	Sorghum	nucleus	28.28	26.94
Solyc03g110840.1.1	Tomato	nucleus	9.73	26.54
Solyc03g110850.1.1	Tomato	cytosol	9.5	25.77
Solyc02g021330.1.1	Tomato	cytosol	8.82	25.49
Os08t0496500-01	Rice	nucleus	11.54	24.88
KRH70416	Soybean	cytosol	8.14	24.83
Os06t0667100-01	Rice	cytosol, nucleus, plastid	12.9	22.8
Os03t0251350-00	Rice	nucleus	12.67	22.76
Solyc11g016910.1.1	Tomato	nucleus	4.75	22.58
Os02t0170500-01	Rice	nucleus	13.12	22.39
Os08t0206500-00	Rice	nucleus	9.73	15.25

Protein Annotations

Gene3D:1.10.20.10	MapMan:35.1	EMBL:AY332467	ProteinID:BAB84457.1	ProteinID:BAF05321.1	ProteinID:BAS72860.1
InterPro:CBFA_NFYB_domain	ProteinID:EAZ12449.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0046982
EMBL:GU120348	InterPro:Histone-fold	InterPro:IPR009072	EnsemblPlantsGene:Os01g0580400	EnsemblPlants:Os01t0580400-01	PFAM:PF00808
PANTHER:PTHR10252	PANTHER:PTHR10252:SF43	UniProt:Q8W099	SUPFAM:SSF47113	UniParc:UPI00000A2AFE	SEG:seg

Description

HAP5J SUBUNIT OF CCAAT-BOX BINDING COMPLEXHistone-fold domain containing protein. (Os01t0580400-01)

Coordinates

chr1:-:22474568..22476504

Molecular Weight (calculated)

48718.9 Da

IEP (calculated)

4.934

GRAVY (calculated)

-0.243

Length

442 amino acids

Sequence
(BLAST)

001: MEQTLDVPRS LRLLAPKAQQ QMDEFWRDRQ KEIETTKDFS EHAIPMARLK KIVSSQKGNM MMTFDMPAFL SKMCELFVQE LAVRAWASAQ SHNRCIILDT
101: DIAKAIASTE SYDFLVDILH NHRVKHKSTP CSTLTTKRCR LVDQPSTSHM PYQHQLPQFA PTYTPAIPIT PSLMPPISHY IPFQYPSLSQ EVSPMMASAP
201: IVNRSMLLIH NIARGLGLQG NNISTFANNN IPDNIVGCSS PTVLASMMSP ALLEVAGTSL NPPNSHSICT MNMINSSDPS GSSIGDINVA NQASLAPSGR
301: FNPAILRESS CPSFLHSNND TIVAIPEGVD ISGTMDVASD VAAIVINGQE EHERETNVEH HQQNEIYESI DIGIINASVA DDNKYSISWD ELGMADDSLL
401: DKFLEEFQVR NDGVLRTGIE LHEDPFLGDV MLANPSTSNA NK

Best Arabidopsis Sequence Match ( AT5G63470.1 )
(BLAST)

001: MDNNNNNNNQ QPPPTSVYPP GSAVTTVIPP PPSGSASIVT GGGATYHHLL QQQQQQLQMF WTYQRQEIEQ VNDFKNHQLP LARIKKIMKA DEDVRMISAE
101: APILFAKACE LFILELTIRS WLHAEENKRR TLQKNDIAAA ITRTDIFDFL VDIVPREEIK EEEDAASALG GGGMVAPAAS GVPYYYPPMG QPAVPGGMMI
201: GRPAMDPSGV YAQPPSQAWQ SVWQNSAGGG DDVSYGSGGS SGHGNLDSQG

Arabidopsis Description

NFYC4NF-YC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UJL4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.