Factsheet for Os05t0304800-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0191900-00	Rice	nucleus	64.22	62.69
OQU83181	Sorghum	nucleus	18.96	36.26
PGSC0003DMT400090065	Potato	nucleus	11.93	26.35
Solyc02g021330.1.1	Tomato	cytosol	12.23	26.14
Solyc03g110840.1.1	Tomato	nucleus	11.93	24.07
Os04t0683400-00	Rice	mitochondrion	8.87	23.2
Solyc11g016920.1.1	Tomato	cytosol	9.79	23.19
PGSC0003DMT400039471	Potato	nucleus	10.7	22.73
HORVU7Hr1G082930.1	Barley	nucleus	28.13	22.6
TraesCS7B01G248300.1	Wheat	cytosol	28.44	22.57
TraesCS7D01G344400.1	Wheat	cytosol	28.13	22.38
Solyc03g110850.1.1	Tomato	cytosol	11.01	22.09
Os09t0480700-01	Rice	nucleus	11.31	22.02
TraesCS7A01G336700.1	Wheat	cytosol	27.52	21.74
Os01t0102400-01	Rice	nucleus	27.22	21.14
KRH70416	Soybean	cytosol	9.17	20.69
Os01t0580400-01	Rice	nucleus	27.83	20.59
Os03t0251350-00	Rice	nucleus	14.07	18.7
Solyc11g016910.1.1	Tomato	nucleus	5.2	18.28
Os02t0170500-01	Rice	nucleus	14.37	18.15
Os08t0496500-01	Rice	nucleus	11.31	18.05
Os06t0667100-01	Rice	cytosol, nucleus, plastid	13.76	18.0
Os08t0206500-00	Rice	nucleus	11.01	12.77

Protein Annotations

Gene3D:1.10.20.10	MapMan:35.2	EntrezGene:4338359	EMBL:AK242136	ProteinID:BAF17058.1	ProteinID:BAS93258.1
InterPro:CBFA_NFYB_domain	ProteinID:EEE63171.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0046982	InterPro:Histone-fold	InterPro:IPR009072
EMBL:KF737322	EnsemblPlantsGene:Os05g0304800	EnsemblPlants:Os05t0304800-01	PFAM:PF00808	PANTHER:PTHR10252	PANTHER:PTHR10252:SF68
UniProt:Q0DJB5	SUPFAM:SSF47113	UniParc:UPI0000E12423	RefSeq:XP_015639189.1	:	:

Description

HAP5K SUBUNIT OF CCAAT-BOX BINDING COMPLEXHistone-fold domain containing protein. (Os05t0304800-01)

Coordinates

chr5:+:13749904..13751460

Molecular Weight (calculated)

36656.3 Da

IEP (calculated)

5.099

GRAVY (calculated)

-0.513

Length

327 amino acids

Sequence
(BLAST)

001: MAIPTKEEVE QNEEDNTFSR LQLLAQQRHA MEEFWRRSQE QIEASAGNHE HILPIDCVKN VIRPKNDAMM LSADTPTFVT KLCELFVQEL TLRAWVCANS
101: HNRDIILGTD IAEAITTTES YHFLGNVLRS HKALGSTAPD IDTSARKHIK LDQMTSLYHP TQEMQASRLA GYPPHVPIYP PIGQMGTQHK LSPFTFMMQG
201: ESLLNMKREK SLVNEVMVCT NKMSINNFDG ATSIGGGSSS DVAIVVQQGE TTHPFSSQNA CPSLEDNYVV PMPTGHVQSF SPPTNINVKK LHQEEKNIYS
301: QDVAEEDMSN ESLEGSQKDE DLFLHEK

Best Arabidopsis Sequence Match ( AT5G63470.1 )
(BLAST)

001: MDNNNNNNNQ QPPPTSVYPP GSAVTTVIPP PPSGSASIVT GGGATYHHLL QQQQQQLQMF WTYQRQEIEQ VNDFKNHQLP LARIKKIMKA DEDVRMISAE
101: APILFAKACE LFILELTIRS WLHAEENKRR TLQKNDIAAA ITRTDIFDFL VDIVPREEIK EEEDAASALG GGGMVAPAAS GVPYYYPPMG QPAVPGGMMI
201: GRPAMDPSGV YAQPPSQAWQ SVWQNSAGGG DDVSYGSGGS SGHGNLDSQG

Arabidopsis Description

NFYC4NF-YC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UJL4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.