Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER96945 | Sorghum | nucleus | 88.69 | 73.76 |
| Zm00001d020874_P001 | Maize | extracellular | 87.5 | 73.5 |
| TraesCS5A01G256500.1 | Wheat | nucleus | 85.71 | 70.94 |
| TraesCS5D01G265000.1 | Wheat | nucleus | 85.12 | 70.44 |
| TraesCS5B01G255900.1 | Wheat | nucleus | 85.12 | 70.44 |
| Os08t0496500-01 | Rice | nucleus | 80.36 | 65.85 |
| GSMUA_Achr4P03920_001 | Banana | nucleus | 44.64 | 55.15 |
| GSMUA_Achr4P13170_001 | Banana | nucleus | 43.45 | 50.0 |
| GSMUA_Achr3P11990_001 | Banana | nucleus | 42.86 | 45.28 |
| Bra030749.1-P | Field mustard | nucleus | 55.95 | 43.12 |
| CDX93525 | Canola | nucleus | 55.95 | 42.73 |
| KRH68581 | Soybean | cytoskeleton, cytosol, nucleus, plastid | 60.12 | 42.62 |
| Os04t0683400-00 | Rice | mitochondrion | 31.55 | 42.4 |
| AT1G54830.3 | Thale cress | nucleus | 54.76 | 42.4 |
| Bra018589.1-P | Field mustard | nucleus | 55.36 | 42.27 |
| Os06t0667100-01 | Rice | cytosol, nucleus, plastid | 61.9 | 41.6 |
| CDY06341 | Canola | nucleus | 55.95 | 41.23 |
| Bra031651.1-P | Field mustard | nucleus | 55.95 | 41.23 |
| AT1G08970.4 | Thale cress | nucleus | 55.95 | 40.69 |
| PGSC0003DMT400008660 | Potato | nucleus | 60.71 | 40.48 |
| Os03t0251350-00 | Rice | nucleus | 58.93 | 40.24 |
| Solyc01g079870.2.1 | Tomato | nucleus | 61.31 | 39.92 |
| PGSC0003DMT400023211 | Potato | nucleus | 60.71 | 39.84 |
| VIT_05s0020g02790.t01 | Wine grape | nucleus | 61.31 | 39.31 |
| CDY31119 | Canola | nucleus | 44.64 | 39.27 |
| KRG96853 | Soybean | nucleus | 60.12 | 39.15 |
| Os02t0170500-01 | Rice | nucleus | 60.12 | 39.0 |
| KRG92828 | Soybean | nucleus | 58.93 | 37.64 |
| KRH43409 | Soybean | nucleus | 45.83 | 37.56 |
| VIT_14s0128g00250.t01 | Wine grape | nucleus | 58.33 | 37.26 |
| CDY22654 | Canola | cytosol | 55.95 | 37.01 |
| GSMUA_Achr1P19420_001 | Banana | nucleus | 42.86 | 36.92 |
| KRH33966 | Soybean | nucleus | 57.74 | 36.74 |
| Zm00001d005993_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 59.52 | 35.84 |
| KRH20896 | Soybean | nucleus | 38.69 | 33.85 |
| CDY32142 | Canola | mitochondrion, nucleus | 55.95 | 31.76 |
| KRH20891 | Soybean | nucleus | 43.45 | 30.04 |
| CDX95019 | Canola | cytosol, mitochondrion, nucleus | 55.95 | 28.75 |
| Os08t0206500-00 | Rice | nucleus | 47.62 | 28.37 |
| KRH20893 | Soybean | nucleus | 43.45 | 27.34 |
| Os01t0102400-01 | Rice | nucleus | 30.95 | 12.35 |
| Os01t0580400-01 | Rice | nucleus | 30.95 | 11.76 |
| Os05t0304800-01 | Rice | nucleus | 22.02 | 11.31 |
| Os10t0191900-00 | Rice | nucleus | 22.02 | 11.04 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:15.5.51.3 | ProteinID:BAF25403.2 | ProteinID:BAT08639.1 | InterPro:CBFA_NFYB_domain | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0046982 | InterPro:Histone-fold | InterPro:IPR009072 | EnsemblPlantsGene:Os09g0480700 | EnsemblPlants:Os09t0480700-01 | PFAM:PF00808 |
| PANTHER:PTHR10252 | PANTHER:PTHR10252:SF76 | UniProt:Q0J0W2 | SUPFAM:SSF47113 | UniParc:UPI0001B65CCF | SEG:seg |
Description
HAP5E SUBUNIT OF CCAAT-BOX BINDING COMPLEXSimilar to Transcription factor Hap5a-like protein. (Os09t0480700-01)
Coordinates
chr9:+:18451612..18452708
Molecular Weight (calculated)
18818.4 Da
IEP (calculated)
6.277
GRAVY (calculated)
-0.440
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: SEEKQQRESF SIPKSPPPPQ TLAKLRSQQQ LQMFWAEQYR EIEATTDFKN HNLPLARIKK IMKADEDVRM IAAEAPVVFA RACEMFILEL THRGWAHAEE
101: NKRRTLQKSD IAAAIARTEV FDFLVDIVPR DDAKDADAAA AAAAAGIPRP AAGVPATDPL AYYYVPQQ
101: NKRRTLQKSD IAAAIARTEV FDFLVDIVPR DDAKDADAAA AAAAAGIPRP AAGVPATDPL AYYYVPQQ
001: MEQSEEGQQQ QQQGVMDYVP PHAYQSGPVN AASHMAFQQA HHFHHHHQQQ QQQQLQMFWA NQMQEIEHTT DFKNHTLPLA RIKKIMKADE DVRMISAEAP
101: VIFAKACEMF ILELTLRAWI HTEENKRRTL QKNDIAAAIS RTDVFDFLVD IIPRDELKEE GLGVTKGTIP SVVGSPPYYY LQQQGMMQHW PQEQHPDES
101: VIFAKACEMF ILELTLRAWI HTEENKRRTL QKNDIAAAIS RTDVFDFLVD IIPRDELKEE GLGVTKGTIP SVVGSPPYYY LQQQGMMQHW PQEQHPDES
Arabidopsis Description
NFYC2Nuclear transcription factor Y subunit C-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LCG7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.