Factsheet for Os01t0102400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0580400-01	Rice	nucleus	91.45	87.1
Os09t0480700-01	Rice	nucleus	12.35	30.95
PGSC0003DMT400039471	Potato	nucleus	10.93	29.87
PGSC0003DMT400090065	Potato	nucleus	10.45	29.73
Solyc11g016920.1.1	Tomato	cytosol	9.5	28.99
EES15819	Sorghum	nucleus	27.32	28.4
Os04t0683400-00	Rice	mitochondrion	8.31	28.0
EES14613	Sorghum	nucleus	30.4	27.77
Os05t0304800-01	Rice	nucleus	21.14	27.22
Zm00001d023466_P001	Maize	cytosol, mitochondrion, nucleus	28.03	26.88
Os10t0191900-00	Rice	nucleus	21.38	26.87
Solyc03g110840.1.1	Tomato	nucleus	10.21	26.54
EES16679	Sorghum	nucleus	28.98	26.29
Solyc03g110850.1.1	Tomato	cytosol	9.98	25.77
Solyc02g021330.1.1	Tomato	cytosol	9.26	25.49
Os08t0496500-01	Rice	nucleus	12.11	24.88
KRH70416	Soybean	cytosol	8.31	24.14
Os06t0667100-01	Rice	cytosol, nucleus, plastid	14.01	23.6
Os03t0251350-00	Rice	nucleus	13.54	23.17
Os02t0170500-01	Rice	nucleus	13.78	22.39
Solyc11g016910.1.1	Tomato	nucleus	4.75	21.51
Os08t0206500-00	Rice	nucleus	9.98	14.89

Protein Annotations

Gene3D:1.10.20.10	MapMan:35.1	EMBL:AK242226	ProteinID:BAB62637.1	ProteinID:BAB64251.1	ProteinID:BAB92139.1
ProteinID:BAF03662.1	ProteinID:BAS69932.1	ProteinID:EAZ10192.1	GO:GO:0000786	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0046982	InterPro:Histone-fold	InterPro:Histone_H2A/H2B/H3	InterPro:IPR009072	EnsemblPlantsGene:Os01g0102400	EnsemblPlants:Os01t0102400-01
PFAM:PF00125	PANTHER:PTHR10252	PANTHER:PTHR10252:SF43	UniProt:Q93VF0	SUPFAM:SSF47113	UniParc:UPI00000ABDD0
SEG:seg	:	:	:	:	:

Description

HAP5H SUBUNIT OF CCAAT-BOX BINDING COMPLEXHistone-fold domain containing protein. (Os01t0102400-01)

Coordinates

chr1:+:139826..141555

Molecular Weight (calculated)

46377.0 Da

IEP (calculated)

4.782

GRAVY (calculated)

-0.264

Length

421 amino acids

Sequence
(BLAST)

001: MEQTLDVPRS LRLPTPKAQQ QMDEFWRDRQ KEIETTKDFS EHAIPMARLK KIASSQKGNM MMSFDMPAFL SKMCELFVQE LAVRAWASAQ SHNRCIILDT
101: DIAEAIASTE SYDFLVDILH NHREKHKSTP CSTLTTKRCR LVDQPSTSRP PYQHQLPLFA PTYTPAIPIT PSLMPPISHY IPFQYPSLSQ EVSTMMASAP
201: IVNRSMLLIH NIARGLGLQG NNISTFANNN IPDNIIGCSS PAVLASMMSP ALLDVAGASL NPPNSHSICT MNMINSSDPS GSSIGDINVA NQASLAPSEH
301: FNPAILQESS CPSFLYNNNN DTIVVVPEGV DISGTMDVAG LVINGQEEEH ERKTNVEQNE IYESIDIGII NASVADGNKC SIRWDELGTA DDSLLDKFLE
401: EFQARNDGVL HSGIVLHEDH S

Best Arabidopsis Sequence Match ( AT5G63470.1 )
(BLAST)

001: MDNNNNNNNQ QPPPTSVYPP GSAVTTVIPP PPSGSASIVT GGGATYHHLL QQQQQQLQMF WTYQRQEIEQ VNDFKNHQLP LARIKKIMKA DEDVRMISAE
101: APILFAKACE LFILELTIRS WLHAEENKRR TLQKNDIAAA ITRTDIFDFL VDIVPREEIK EEEDAASALG GGGMVAPAAS GVPYYYPPMG QPAVPGGMMI
201: GRPAMDPSGV YAQPPSQAWQ SVWQNSAGGG DDVSYGSGGS SGHGNLDSQG

Arabidopsis Description

NFYC4NF-YC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UJL4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.