Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
20408568
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER96945 | Sorghum | nucleus | 96.5 | 95.54 |
| TraesCS5A01G256500.1 | Wheat | nucleus | 91.5 | 90.15 |
| TraesCS5D01G265000.1 | Wheat | nucleus | 91.0 | 89.66 |
| TraesCS5B01G255900.1 | Wheat | nucleus | 91.0 | 89.66 |
| Os09t0480700-01 | Rice | nucleus | 73.5 | 87.5 |
| Zm00001d031310_P001 | Maize | nucleus | 77.0 | 77.0 |
| Zm00001d052838_P001 | Maize | nucleus | 74.0 | 73.27 |
| GSMUA_Achr4P03920_001 | Banana | nucleus | 41.0 | 60.29 |
| GSMUA_Achr4P13170_001 | Banana | nucleus | 38.5 | 52.74 |
| GSMUA_Achr3P11990_001 | Banana | nucleus | 40.5 | 50.94 |
| KRH68581 | Soybean | cytoskeleton, cytosol, nucleus, plastid | 57.0 | 48.1 |
| Zm00001d046967_P001 | Maize | nucleus | 58.5 | 47.18 |
| CDX93525 | Canola | nucleus | 50.5 | 45.91 |
| Bra018589.1-P | Field mustard | nucleus | 50.0 | 45.45 |
| Bra030749.1-P | Field mustard | nucleus | 49.5 | 45.41 |
| AT1G54830.3 | Thale cress | nucleus | 49.0 | 45.16 |
| Zm00001d036648_P001 | Maize | extracellular | 55.0 | 44.9 |
| Bra031651.1-P | Field mustard | nucleus | 51.0 | 44.74 |
| CDY06341 | Canola | nucleus | 51.0 | 44.74 |
| Zm00001d024230_P001 | Maize | nucleus, plastid | 55.5 | 44.22 |
| KRG96853 | Soybean | nucleus | 57.0 | 44.19 |
| PGSC0003DMT400023211 | Potato | nucleus | 56.5 | 44.14 |
| Solyc01g079870.2.1 | Tomato | nucleus | 56.5 | 43.8 |
| AT1G08970.4 | Thale cress | nucleus | 50.5 | 43.72 |
| PGSC0003DMT400008660 | Potato | nucleus | 55.0 | 43.65 |
| VIT_05s0020g02790.t01 | Wine grape | nucleus | 57.0 | 43.51 |
| Zm00001d005993_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 59.0 | 42.29 |
| Zm00001d028432_P001 | Maize | nucleus | 51.5 | 42.04 |
| CDY31119 | Canola | nucleus | 40.0 | 41.88 |
| VIT_14s0128g00250.t01 | Wine grape | nucleus | 55.0 | 41.83 |
| KRG92828 | Soybean | nucleus | 54.0 | 41.06 |
| KRH33966 | Soybean | nucleus | 54.0 | 40.91 |
| GSMUA_Achr1P19420_001 | Banana | nucleus | 39.5 | 40.51 |
| CDY22654 | Canola | cytosol | 51.0 | 40.16 |
| Zm00001d026648_P001 | Maize | mitochondrion | 25.5 | 40.16 |
| KRH43409 | Soybean | nucleus | 41.0 | 40.0 |
| KRH20896 | Soybean | nucleus | 36.0 | 37.5 |
| CDY32142 | Canola | mitochondrion, nucleus | 49.5 | 33.45 |
| KRH20891 | Soybean | nucleus | 39.5 | 32.51 |
| CDX95019 | Canola | cytosol, mitochondrion, nucleus | 50.5 | 30.89 |
| KRH20893 | Soybean | nucleus | 39.5 | 29.59 |
| Zm00001d023466_P001 | Maize | cytosol, mitochondrion, nucleus | 21.0 | 9.57 |
Protein Annotations
| Gene3D:1.10.20.10 | EntrezGene:100282924 | MapMan:15.5.51.3 | ProteinID:AIB04483.1 | UniProt:B6SII8 | InterPro:CBFA_NFYB_domain |
| EMBL:EU952553 | EMBL:EU962806 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046982 | InterPro:Histone-fold | InterPro:IPR009072 |
| ProteinID:ONM55746.1 | PFAM:PF00808 | PANTHER:PTHR10252 | PANTHER:PTHR10252:SF76 | SUPFAM:SSF47113 | UniParc:UPI000152A2E5 |
| EnsemblPlantsGene:Zm00001d020874 | EnsemblPlants:Zm00001d020874_P001 | EnsemblPlants:Zm00001d020874_T001 | SEG:seg | : | : |
Description
CCAAT-HAP5-transcription factor 516 CCAAT-HAP5-transcription factor 516
Coordinates
chr7:+:135216263..135216865
Molecular Weight (calculated)
21341.3 Da
IEP (calculated)
5.262
GRAVY (calculated)
-0.205
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPNKSSTPP PPPVMGAPVA YPPPAYPPGV AAGAGAYPPQ LYAPPAAAAA QQAAAAQQQQ LQIFWAEQYR EIEATTDFKN HNLPLARIKK IMKADEDVRM
101: IAAEAPVVFA RACEMFILEL THRGWAHAEE NKRRTLQKSD IAAAIARTEV FDFLVDIVPR DDGKDADAAA AAAAAAAGIP RPAAGVPATD PLAYYYVPQQ
101: IAAEAPVVFA RACEMFILEL THRGWAHAEE NKRRTLQKSD IAAAIARTEV FDFLVDIVPR DDGKDADAAA AAAAAAAGIP RPAAGVPATD PLAYYYVPQQ
001: MDQQGQSSAM NYGSNPYQTN AMTTTPTGSD HPAYHQIHQQ QQQQLTQQLQ SFWETQFKEI EKTTDFKNHS LPLARIKKIM KADEDVRMIS AEAPVVFARA
101: CEMFILELTL RSWNHTEENK RRTLQKNDIA AAVTRTDIFD FLVDIVPRED LRDEVLGGVG AEAATAAGYP YGYLPPGTAP IGNPGMVMGN PGAYPPNPYM
201: GQPMWQQPGP EQQDPDN
101: CEMFILELTL RSWNHTEENK RRTLQKNDIA AAVTRTDIFD FLVDIVPRED LRDEVLGGVG AEAATAAGYP YGYLPPGTAP IGNPGMVMGN PGAYPPNPYM
201: GQPMWQQPGP EQQDPDN
Arabidopsis Description
NFYC3Nuclear transcription factor Y subunit C-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.