Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER96945 | Sorghum | nucleus | 44.09 | 60.89 |
| Os09t0480700-01 | Rice | nucleus | 35.84 | 59.52 |
| Zm00001d020874_P001 | Maize | extracellular | 42.29 | 59.0 |
| TraesCS5A01G256500.1 | Wheat | nucleus | 41.22 | 56.65 |
| TraesCS5B01G255900.1 | Wheat | nucleus | 41.22 | 56.65 |
| TraesCS5D01G265000.1 | Wheat | nucleus | 40.86 | 56.16 |
| Zm00001d031310_P001 | Maize | nucleus | 39.07 | 54.5 |
| Zm00001d052838_P001 | Maize | nucleus | 36.2 | 50.0 |
| GSMUA_Achr4P03920_001 | Banana | nucleus | 22.94 | 47.06 |
| Zm00001d046967_P001 | Maize | nucleus | 36.92 | 41.53 |
| GSMUA_Achr3P11990_001 | Banana | nucleus | 23.66 | 41.51 |
| GSMUA_Achr4P13170_001 | Banana | nucleus | 21.15 | 40.41 |
| Zm00001d036648_P001 | Maize | extracellular | 34.77 | 39.59 |
| CDX93525 | Canola | nucleus | 30.11 | 38.18 |
| Bra018589.1-P | Field mustard | nucleus | 30.11 | 38.18 |
| KRH68581 | Soybean | cytoskeleton, cytosol, nucleus, plastid | 32.26 | 37.97 |
| AT1G54830.3 | Thale cress | nucleus | 29.39 | 37.79 |
| Bra030749.1-P | Field mustard | nucleus | 28.67 | 36.7 |
| Zm00001d024230_P001 | Maize | nucleus, plastid | 32.97 | 36.65 |
| PGSC0003DMT400023211 | Potato | nucleus | 33.33 | 36.33 |
| Zm00001d028432_P001 | Maize | nucleus | 31.9 | 36.33 |
| Solyc01g079870.2.1 | Tomato | nucleus | 33.33 | 36.05 |
| PGSC0003DMT400008660 | Potato | nucleus | 32.26 | 35.71 |
| Bra031651.1-P | Field mustard | nucleus | 29.03 | 35.53 |
| CDY06341 | Canola | nucleus | 29.03 | 35.53 |
| AT1G08970.4 | Thale cress | nucleus | 29.03 | 35.06 |
| KRG96853 | Soybean | nucleus | 32.26 | 34.88 |
| GSMUA_Achr1P19420_001 | Banana | nucleus | 24.37 | 34.87 |
| VIT_05s0020g02790.t01 | Wine grape | nucleus | 32.62 | 34.73 |
| Zm00001d026648_P001 | Maize | mitochondrion | 15.77 | 34.65 |
| CDY31119 | Canola | nucleus | 23.66 | 34.55 |
| KRH20896 | Soybean | nucleus | 23.66 | 34.38 |
| KRH43409 | Soybean | nucleus | 25.09 | 34.15 |
| KRG92828 | Soybean | nucleus | 31.54 | 33.46 |
| KRH33966 | Soybean | nucleus | 31.54 | 33.33 |
| VIT_14s0128g00250.t01 | Wine grape | nucleus | 30.82 | 32.7 |
| CDY22654 | Canola | cytosol | 29.03 | 31.89 |
| KRH20891 | Soybean | nucleus | 24.37 | 27.98 |
| CDY32142 | Canola | mitochondrion, nucleus | 28.67 | 27.03 |
| CDX95019 | Canola | cytosol, mitochondrion, nucleus | 30.11 | 25.69 |
| KRH20893 | Soybean | nucleus | 23.3 | 24.34 |
| Zm00001d023466_P001 | Maize | cytosol, mitochondrion, nucleus | 13.62 | 8.66 |
Protein Annotations
| Gene3D:1.10.20.10 | EntrezGene:103647526 | MapMan:15.5.51.3 | UniProt:A0A1D6ERZ0 | InterPro:CBFA_NFYB_domain | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0046982 | InterPro:Histone-fold | InterPro:IPR009072 | ProteinID:ONM22503.1 | PFAM:PF00808 | PANTHER:PTHR10252 |
| PANTHER:PTHR10252:SF76 | SUPFAM:SSF47113 | UniParc:UPI0004DE7B72 | EnsemblPlantsGene:Zm00001d005993 | EnsemblPlants:Zm00001d005993_P001 | EnsemblPlants:Zm00001d005993_T001 |
| SEG:seg | : | : | : | : | : |
Description
CCAAT-HAP5-transcription factor 512Nuclear transcription factor Y subunit C-9
Coordinates
chr2:+:194914879..194915718
Molecular Weight (calculated)
29571.3 Da
IEP (calculated)
5.875
GRAVY (calculated)
-0.052
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPSQSGTPS LFPVMDIPVA YPPAAYPPCE VAVAAAAYPR LLYAPPDAAA AQQAAAAQQQ QQLLGAPVVC PPAAYPPGEV AVAAAAYPPQ LYAPPDAAAA
101: QQATAAQQQL LGAPVRVAYA PPDAAAVQQA AAAQKHKHQL QMLWLELRRE IEATTDFKKH NIPLSRIKKI MRADPDVCAI TAEVLVVFPW ACEMFILELT
201: RHGWAHAEAN KRRMLQKSDI VAAIARTDVF DFFRDTVLHD DAKEGADAAP AAAAAAEKAH PAAGAPATDP LANYPMPQQ
101: QQATAAQQQL LGAPVRVAYA PPDAAAVQQA AAAQKHKHQL QMLWLELRRE IEATTDFKKH NIPLSRIKKI MRADPDVCAI TAEVLVVFPW ACEMFILELT
201: RHGWAHAEAN KRRMLQKSDI VAAIARTDVF DFFRDTVLHD DAKEGADAAP AAAAAAEKAH PAAGAPATDP LANYPMPQQ
001: MDNNNNNNNQ QPPPTSVYPP GSAVTTVIPP PPSGSASIVT GGGATYHHLL QQQQQQLQMF WTYQRQEIEQ VNDFKNHQLP LARIKKIMKA DEDVRMISAE
101: APILFAKACE LFILELTIRS WLHAEENKRR TLQKNDIAAA ITRTDIFDFL VDIVPREEIK EEEDAASALG GGGMVAPAAS GVPYYYPPMG QPAVPGGMMI
201: GRPAMDPSGV YAQPPSQAWQ SVWQNSAGGG DDVSYGSGGS SGHGNLDSQG
101: APILFAKACE LFILELTIRS WLHAEENKRR TLQKNDIAAA ITRTDIFDFL VDIVPREEIK EEEDAASALG GGGMVAPAAS GVPYYYPPMG QPAVPGGMMI
201: GRPAMDPSGV YAQPPSQAWQ SVWQNSAGGG DDVSYGSGGS SGHGNLDSQG
Arabidopsis Description
NFYC4NF-YC4 [Source:UniProtKB/TrEMBL;Acc:A0A178UJL4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.