Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS2A01G504600.1 | |
| TraesCS2D01G505300.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G59840.1 | TraesCS2A01G504600.1 | AT1G22920.1 | 21798944 |
| AT3G59840.1 | TraesCS2D01G505300.1 | AT1G22920.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G319500.1 | Wheat | mitochondrion | 98.04 | 98.04 |
| HORVU1Hr1G066520.2 | Barley | mitochondrion | 97.06 | 97.06 |
| TraesCS1B01G331800.1 | Wheat | mitochondrion | 96.08 | 94.23 |
| Os05t0500450-00 | Rice | mitochondrion | 71.57 | 73.74 |
| Zm00001d038607_P001 | Maize | plastid | 72.55 | 73.27 |
| EES19768 | Sorghum | mitochondrion, plastid | 74.51 | 71.03 |
| Bra007481.1-P | Field mustard | cytosol, plastid | 50.98 | 56.52 |
| VIT_02s0012g00610.t01 | Wine grape | cytosol, plastid | 52.94 | 55.67 |
| PGSC0003DMT400062222 | Potato | cytosol | 54.9 | 54.9 |
| Solyc08g077280.1.1 | Tomato | cytosol | 54.9 | 54.9 |
| Bra003393.1-P | Field mustard | plastid | 49.02 | 53.76 |
| AT3G59840.1 | Thale cress | cytosol, plastid | 50.0 | 52.58 |
| KRH28253 | Soybean | cytosol | 47.06 | 48.98 |
| KRH77243 | Soybean | mitochondrion | 46.08 | 45.19 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G319300.1 | EnsemblPlantsGene:TraesCS1D01G319300 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009941 | SEG:seg | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr1D:-:413415835..413416143
Molecular Weight (calculated)
10784.6 Da
IEP (calculated)
5.021
GRAVY (calculated)
-0.290
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLFSWWRGS RRGSPEQAPN QQPAKGAGGA QAQVAVPGTH GAVEVLRQRQ PDATVFEFGS AAESGTAVTL AGYCPVSDEL EPCRWELVPA TGEGAPQFRI
101: VF
101: VF
1: MGILSWFTGS PKPSQSETSK PEMIQMPKSE TPAPGMNGAI EVPRPDRATV FEFGSVAATG DRVTLAGYCP VSDDLEPCRW EILPADGKDA PQFRVVF
Arabidopsis Description
Allyl alcohol dehydrogenase-like protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ93]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.