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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome

Predictor Summary:
  • plastid 1
  • mitochondrion 4
  • peroxisome 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, peroxisome
Any Predictor:mitochondrion, peroxisome, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:peroxisome
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:peroxisome
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G237500.1 Wheat plastid 99.56 99.56
TraesCS3A01G237100.1 Wheat golgi 90.02 99.27
Os01t0654500-01 Rice extracellular, plasma membrane, plastid 85.37 93.45
OQU87253 Sorghum cytoskeleton, cytosol, peroxisome 84.48 92.48
Zm00001d044021_P001 Maize extracellular 84.26 92.23
Zm00001d011487_P001 Maize extracellular 83.59 91.5
HORVU3Hr1G059060.2 Barley mitochondrion 91.8 87.53
TraesCS3B01G199500.1 Wheat peroxisome 74.94 81.64
TraesCS2B01G381500.1 Wheat mitochondrion 72.73 68.91
Protein Annotations
KEGG:00020+1.1.1.42KEGG:00480+1.1.1.42KEGG:00720+1.1.1.42Gene3D:3.40.718.10MapMan:50.1.1GO:GO:0000166
GO:GO:0000287GO:GO:0003674GO:GO:0003824GO:GO:0004450GO:GO:0005488GO:GO:0006102
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016616GO:GO:0051287GO:GO:0055114
InterPro:IsoCit/isopropylmalate_DH_CSInterPro:IsoPropMal-DH-like_domInterPro:Isocitrate_DH_NADPPFAM:PF00180PIRSF:PIRSF000108ScanProsite:PS00470
PANTHER:PTHR11822PANTHER:PTHR11822:SF24SMART:SM01329SUPFAM:SSF53659TIGRFAMs:TIGR00127EnsemblPlantsGene:TraesCS3B01G265700
EnsemblPlants:TraesCS3B01G265700.1SEG:seg::::
Description
No Description!
Coordinates
chr3B:-:425677508..425681536
Molecular Weight (calculated)
50605.6 Da
IEP (calculated)
8.063
GRAVY (calculated)
-0.314
Length
451 amino acids
Sequence
(BLAST)
001: MRWQSYSLRS LTSPCHHSRR LPHQPAPIRS RPPRQSASAA AAMAFEKIKV ANPIVEMDGD EMTRVFWQSI KDKLIFPFLD LDIKYFDLGV LHRDATDDKV
101: TVEAAEATLK YNVAIKCATI TPDEDRVKEF NLKQMWRSPN GTIRNIINGT VFREPIICKN VPKLVPGWTK PICIGRHAFG DQYRATDAVL KGPGKLRLVF
201: EGKDETVDLE VFNFTGAGGV AMAMYNTDES IRGFAEASMA IAYEKKWPLY LSTKNTILKK YDGRFKDIFQ EIYEAGWKSK YEAAGIWYEH RLIDDMVAYA
301: LKSEGGYVWA CKNYDGDVQS DFLAQGFGSL GLMTSVLMCP DGKTIEAEAA HGTVTRHFRV HQKGGETSTN SIASIFAWTR GLAHRAKLDE NARLLEFAQK
401: LEEACVGTVE SGKMTKDLAL LVHGSSKVTR SDYLNTEEFI DAVAAELKSR L
Best Arabidopsis Sequence Match ( AT1G65930.1 )
(BLAST)
001: MAFEKIKVAN PIVEMDGDEM TRVIWKSIKD KLITPFVELD IKYFDLGLPH RDATDDKVTI ESAEATKKYN VAIKCATITP DEGRVTEFGL KQMWRSPNGT
101: IRNILNGTVF REPIICKNVP KLVPGWTKPI CIGRHAFGDQ YRATDAVIKG PGKLTMTFEG KDGKTETEVF TFTGEGGVAM AMYNTDESIR AFADASMNTA
201: YEKKWPLYLS TKNTILKKYD GRFKDIFQEV YEASWKSKYD AAGIWYEHRL IDDMVAYALK SEGGYVWACK NYDGDVQSDF LAQGFGSLGL MTSVLVCPDG
301: KTIEAEAAHG TVTRHFRVHQ KGGETSTNSI ASIFAWTRGL AHRAKLDDNA KLLDFTEKLE AACVGTVESG KMTKDLALII HGSKLSRDTY LNTEEFIDAV
401: AAELKERLNA
Arabidopsis Description
CICDHIsocitrate dehydrogenase [NADP] [Source:UniProtKB/TrEMBL;Acc:A0A178W7K0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.