Factsheet for TraesCS3D01G472200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G477500.1	Wheat	cytosol	99.56	99.56
TraesCSU01G051800.1	Wheat	cytosol	99.56	99.56
HORVU3Hr1G104360.1	Barley	cytosol	95.79	99.08
Os01t0939500-00	Rice	cytosol	90.47	93.58
GSMUA_Achr6P10000_001	Banana	cytosol	57.43	91.2
GSMUA_Achr10P...	Banana	cytosol	56.1	90.68
TraesCS4D01G038300.1	Wheat	cytosol	83.15	85.81
TraesCS1D01G237100.1	Wheat	cytosol	80.49	82.31
TraesCS3D01G472100.1	Wheat	cytosol	78.27	80.23
GSMUA_Achr10P...	Banana	cytosol	12.64	57.0
Bra020726.1-P	Field mustard	cytosol	25.28	43.85
CDY45916	Canola	cytosol	25.28	43.85

Protein Annotations

MapMan:17.3.2.1.1	Gene3D:3.30.1330.30	Gene3D:3.30.420.60	Gene3D:3.30.960.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003747	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006412	GO:GO:0006415	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	InterPro:IPR024049	InterPro:IPR029064
InterPro:L30e-like	PFAM:PF03463	PFAM:PF03464	PFAM:PF03465	PANTHER:PTHR10113	PANTHER:PTHR10113:SF19
InterPro:Peptide_chain-rel_eRF1/aRF1	InterPro:Release_factor_eRF1/aRF1_N	SMART:SM01194	SUPFAM:SSF53137	SUPFAM:SSF55315	SUPFAM:SSF55481
TIGRFAMs:TIGR03676	EnsemblPlantsGene:TraesCS3D01G472200	EnsemblPlants:TraesCS3D01G472200.1	InterPro:eRF1_1_Pelota	InterPro:eRF1_2	InterPro:eRF1_3
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:574238569..574239924

Molecular Weight (calculated)

50465.7 Da

IEP (calculated)

5.174

GRAVY (calculated)

-0.424

Length

451 amino acids

Sequence
(BLAST)

001: MFYLVGEGRG GNTTKMADGH DNDKNIEIWK VKKLIKGLDA ARGNGTSMIS LIMPPRDQVS RVTKMLGDEY GTASNIKSRV NRQSVLAAIT SAQQRLKLYN
101: RVPPNGLVLY TGTIVTDEGK EKKVTFDFEP FRPINASLYL CDNKFHTEAL NELLESDDKF GFIVMDGNGT LFGTLSGNTR EVLHKFSVDL PKKHGRGGQS
201: ALRFARLRME KRHNYVRKTA ELATQFFINP ATSQPNVSGL ILAGSADFKT ELSQSDMFDQ RLATKILKVV DVSYGGENGF NQAIEISAEV LSNVKFIQEK
301: KLIGKYFEEI SQDTGKYVFG VDDTMAALEM GAVETLIVWE NLDINRYVLK NSATGETSVK HFNKAQEADQ SNFKDKATSA DLEVVENTSL LEWFAENYRQ
401: FGCTLEFITN KSQEGSQFCR GFGGIGGILR YQVEVNAYED VSDEEYEEDF E

Best Arabidopsis Sequence Match ( AT1G12920.1 )
(BLAST)

001: MAEEADTNIE IWKIKKLIKG LESARGNGTS MISLIMPPRD QVSRVTKMLG DEYGTASNIK SRVNRQSVLS AITSAQQRLK LYNKVPTNGL VLYTGTIVND
101: DGKEKKVTFD FEPFRPINAS LYLCDNKFHT EALNELLESD DKFGFIVMDG NGTLFGTLSG NTREVLHKFT VDLPKKHGRG GQSALRFARL RMEKRHNYVR
201: KTAELATQFY INPATSQPNV SGLILAGSAD FKTELSQSEL FDPRLQAKIL NVVDVSYGGE NGFNQAIELS AEILSNVKFI QEKKLIGKYF EEISQDTGKY
301: VFGVEDTLKA LEMGAIETLI VWENLDINRY ELKNSTTGEM VVKHFGKDQE SDTSNFHDSE TNAELEVQEK MPLLEWFANE YKRFGCTLEF VTNKSQEGSQ
401: FCRGFGGIGG MLRYQLDMRT FDELSDTEVY EDSD

Arabidopsis Description

ERF1-2Eukaryotic peptide chain release factor subunit 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPV8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.