Factsheet for Os01t0939500-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G104360.1	Barley	cytosol	93.35	93.35
GSMUA_Achr6P10000_001	Banana	cytosol	59.63	91.55
TraesCSU01G051800.1	Wheat	cytosol	93.81	90.69
TraesCS3A01G477500.1	Wheat	cytosol	93.58	90.47
TraesCS3D01G472200.1	Wheat	cytosol	93.58	90.47
GSMUA_Achr10P...	Banana	cytosol	57.8	90.32
Os03t0702800-01	Rice	cytosol, plasma membrane	87.16	86.96
Os07t0587400-01	Rice	cytosol	86.47	86.27
Os05t0373900-01	Rice	cytosol, plasma membrane	82.57	81.82
TraesCS3D01G472100.1	Wheat	cytosol	78.9	78.18
HORVU3Hr1G104200.2	Barley	cytosol	78.21	77.68
TraesCSU01G150500.1	Wheat	cytosol	78.21	77.15
TraesCS3A01G477400.1	Wheat	cytosol	76.61	75.57
GSMUA_Achr10P...	Banana	cytosol	12.84	56.0
Bra020726.1-P	Field mustard	cytosol	25.92	43.46
CDY45916	Canola	cytosol	25.92	43.46

Protein Annotations

MapMan:17.3.2.1.1	Gene3D:3.30.1330.30	Gene3D:3.30.420.60	Gene3D:3.30.960.10	EntrezGene:4326511	ProteinID:BAB89728.1
ProteinID:BAB90251.1	ProteinID:BAF07263.1	ProteinID:BAS76142.1	ProteinID:EAZ14785.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003747	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006412	GO:GO:0006415	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	InterPro:IPR024049	InterPro:IPR029064
InterPro:L30e-like	EnsemblPlantsGene:Os01g0939500	EnsemblPlants:Os01t0939500-00	PFAM:PF03463	PFAM:PF03464	PFAM:PF03465
PANTHER:PTHR10113	PANTHER:PTHR10113:SF19	InterPro:Peptide_chain-rel_eRF1/aRF1	UniProt:Q8RV12	InterPro:Release_factor_eRF1/aRF1_N	SMART:SM01194
SUPFAM:SSF53137	SUPFAM:SSF55315	SUPFAM:SSF55481	TIGRFAMs:TIGR03676	UniParc:UPI00000A6C04	RefSeq:XP_015625135.1
InterPro:eRF1_1_Pelota	InterPro:eRF1_2	InterPro:eRF1_3	SEG:seg	:	:

Description

Similar to Eukaryotic peptide chain release factor subunit 1-2 (eRF1-2) (Eukaryotic release factor 1-2) (Omnipotent suppressor protein 1 homolog 2) (SUP1 homolog 2). (Os01t0939500-00)

Coordinates

chr1:+:41242467..41243777

Molecular Weight (calculated)

49072.1 Da

IEP (calculated)

5.082

GRAVY (calculated)

-0.438

Length

436 amino acids

Sequence
(BLAST)

001: MADSHETDKN IEIWKVKKLI KGLDAARGNG TSMISLIMPP RDQVSRVTKM LGDEYGTASN IKSRVNRQSV LAAITSAQQR LKLYNRVPPN GLVLYTGTIV
101: TDEGKEKKVT VDFEPFRPIN ASLYLCDNKF HTEALNELLE SDDKFGFIIM DGNGTLFGTL SGNSREVLHK FSVDLPKKHG RGGQSALRFA RLRMEKRHNY
201: VRKTAELATQ FFINPATSQP NVSGLIIAGS ADFKTELSQS DMFDQRLQAK ILKVVDVSYG GENGFNQAIE ISAEELSNVK FIQEKKLIGK YFEEISQDTG
301: KYVFSVDDTM SALEMGAVET LIVWENLDIN RYVLKNSVTG ETTVKHLNKA QETDQSNFRD KATSAELEVI EKTLLLEWFA ENYRQFGCSL EFVTNKSQEG
401: SQFVRGFGGI GGILRYQVEI NAYEDLSDEE YDEDYE

Best Arabidopsis Sequence Match ( AT3G26618.1 )
(BLAST)

001: MADQESDKNI EIWKIKKLIK GLETARGNGT SMISLIMPPR DQVARVTKML ADEYGTASNI KSRVNRQSVL SAITSAQQRL KLYNKVPPNG LVLYTGTIVT
101: DDGKEKKVTI DFEPFKPINA SLYLCDNKFH TEPLNELLES DDKFGFIVMD GNGTLFGTLS GNTREVLHKF TVDLPKKHGR GGQSALRFAR LRMEKRHNYV
201: RKTAELATQF YINPATSQPN VSGLILAGSA DFKTELSQSE LFDPRLQAKI LNVVDVSYGG ENGFNQAIEL SAEILSNVKF IQEKKLIGKY FEEISQDTGK
301: YVFGVEDTLK ALEMGAVETL IVWENLDINR YELKNNTTGE IVIKHLGKDQ ENNQSNFHDA ETNAELEVQE KMPLLEWFAN EYKRFGCTLE FVTNKSQEGS
401: QFCRGFGGIG GLLRYQLDMR TFDELSDGEV YEDSD

Arabidopsis Description

ERF1-3ERF1-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VIS2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.