Factsheet for HORVU3Hr1G104200.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G472100.1	Wheat	cytosol	89.29	89.09
TraesCSU01G150500.1	Wheat	cytosol	87.02	86.43
TraesCS3A01G477400.1	Wheat	cytosol	86.79	86.2
HORVU3Hr1G104360.1	Barley	cytosol	80.41	80.96
Os01t0939500-00	Rice	cytosol	77.68	78.21
GSMUA_Achr6P10000_001	Banana	cytosol	48.75	75.35
GSMUA_Achr10P...	Banana	cytosol	46.92	73.84
HORVU4Hr1G006500.2	Barley	cytosol	71.53	71.04
HORVU1Hr1G057880.1	Barley	cytosol	69.93	69.61
HORVU2Hr1G035400.1	Barley	cytosol	72.44	67.09
HORVU3Hr1G060530.4	Barley	cytosol	33.94	61.32
GSMUA_Achr10P...	Banana	cytosol	10.93	48.0
HORVU3Hr1G046830.1	Barley	mitochondrion	8.66	46.91
Bra020726.1-P	Field mustard	cytosol	19.59	33.08
CDY45916	Canola	cytosol	19.59	33.08

Protein Annotations

MapMan:17.3.2.1.1	Gene3D:3.30.1330.30	Gene3D:3.30.420.60	Gene3D:3.30.960.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003747	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006412	GO:GO:0006415	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	EnsemblPlantsGene:HORVU3Hr1G104200	EnsemblPlants:HORVU3Hr1G104200.2
InterPro:IPR024049	InterPro:IPR029064	InterPro:L30e-like	UniProt:M0Y9Y8	PFAM:PF03463	PFAM:PF03464
PFAM:PF03465	PANTHER:PTHR10113	PANTHER:PTHR10113:SF19	InterPro:Peptide_chain-rel_eRF1/aRF1	InterPro:Release_factor_eRF1/aRF1_N	SMART:SM01194
SUPFAM:SSF53137	SUPFAM:SSF55315	SUPFAM:SSF55481	TIGRFAMs:TIGR03676	UniParc:UPI00029611EC	InterPro:eRF1_1_Pelota
InterPro:eRF1_2	InterPro:eRF1_3	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:666214690..666217497

Molecular Weight (calculated)

49273.3 Da

IEP (calculated)

4.933

GRAVY (calculated)

-0.346

Length

439 amino acids

Sequence
(BLAST)

001: MISLIVPPRD QVCRVTKMLG DEHGTASNIK RRVNRQSVLA AITSAQQKLK LYNRVPTNGL VLYTGTIVTD EGKEKKVSIG FEPFRPVNAF LYLCDNKFHT
101: EALHELLESD DKFGFIVMDG NGTLFGTLSG NTREVLHKFS VDLPKKHGRG GQSALRFSRL RMENRHNYVR RTAELATRFF INPATSQPNV SGLILAGCAD
201: LKTELSQSDL FDQRLAAKIL KVVTVSHGGE DAFNQAIEIS AEVLSNVKFI QEKKLIGKYF EEISLDTGKY VFGVDDTMSV LEMGAVETLI VWENLDINRY
301: ILKNSATGET VVMHFNTVQE ADHSNFKDEA TSADLEVVET TLLLEWFVEN YRQFGCALEL ITNNTEEGSQ FCMGYGGIGG ILRYRVDLNA YEDPSDEEYD
401: EGFEEQSTET SVLEEPVLAR NRNTPRQEAE AFTNSSRKN

Best Arabidopsis Sequence Match ( AT1G12920.1 )
(BLAST)

001: MAEEADTNIE IWKIKKLIKG LESARGNGTS MISLIMPPRD QVSRVTKMLG DEYGTASNIK SRVNRQSVLS AITSAQQRLK LYNKVPTNGL VLYTGTIVND
101: DGKEKKVTFD FEPFRPINAS LYLCDNKFHT EALNELLESD DKFGFIVMDG NGTLFGTLSG NTREVLHKFT VDLPKKHGRG GQSALRFARL RMEKRHNYVR
201: KTAELATQFY INPATSQPNV SGLILAGSAD FKTELSQSEL FDPRLQAKIL NVVDVSYGGE NGFNQAIELS AEILSNVKFI QEKKLIGKYF EEISQDTGKY
301: VFGVEDTLKA LEMGAIETLI VWENLDINRY ELKNSTTGEM VVKHFGKDQE SDTSNFHDSE TNAELEVQEK MPLLEWFANE YKRFGCTLEF VTNKSQEGSQ
401: FCRGFGGIGG MLRYQLDMRT FDELSDTEVY EDSD

Arabidopsis Description

ERF1-2Eukaryotic peptide chain release factor subunit 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPV8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.