Factsheet for Bra020726.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45916	Canola	cytosol	100.0	100.0
GSMUA_Achr6P10000_001	Banana	cytosol	38.08	34.86
GSMUA_Achr10P...	Banana	cytosol	37.31	34.77
Bra037523.1-P	Field mustard	cytosol	45.38	27.19
HORVU3Hr1G104360.1	Barley	cytosol	43.85	26.15
Os01t0939500-00	Rice	cytosol	43.46	25.92
Bra016748.1-P	Field mustard	cytosol	42.69	25.52
Bra034244.1-P	Field mustard	cytosol	42.31	25.29
TraesCSU01G051800.1	Wheat	cytosol	43.85	25.28
TraesCS3D01G472200.1	Wheat	cytosol	43.85	25.28
TraesCS3A01G477500.1	Wheat	cytosol	43.85	25.28
HORVU1Hr1G057880.1	Barley	cytosol	42.31	24.94
TraesCS1B01G248600.1	Wheat	cytosol	41.15	24.32
TraesCS1D01G237100.1	Wheat	cytosol	41.15	24.26
Zm00001d037868_P001	Maize	cytosol	40.38	23.97
Os05t0373900-01	Rice	cytosol, plasma membrane	40.38	23.86
TraesCS1A01G235000.1	Wheat	cytosol	39.62	23.25
OQU77890	Sorghum	cytosol	40.77	23.25
HORVU3Hr1G104200.2	Barley	cytosol	33.08	19.59
TraesCSU01G150500.1	Wheat	cytosol	32.69	19.23
TraesCS3D01G472100.1	Wheat	cytosol	32.31	19.09
TraesCS3A01G477400.1	Wheat	cytosol	31.92	18.78
Bra019799.1-P	Field mustard	cytosol	5.38	13.59
GSMUA_Achr10P...	Banana	cytosol	3.08	8.0

Protein Annotations

Gene3D:3.30.960.10	MapMan:35.1	EnsemblPlantsGene:Bra020726	EnsemblPlants:Bra020726.1	EnsemblPlants:Bra020726.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003747	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006412	GO:GO:0006415	GO:GO:0008135	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	InterPro:IPR024049
InterPro:IPR029064	InterPro:L30e-like	UniProt:M4DW32	PFAM:PF03463	PFAM:PF03465	PANTHER:PTHR10113
PANTHER:PTHR10113:SF19	InterPro:Peptide_chain-rel_eRF1/aRF1	InterPro:Release_factor_eRF1/aRF1_N	SMART:SM01194	SUPFAM:SSF55315	SUPFAM:SSF55481
UniParc:UPI0002546144	InterPro:eRF1_1_Pelota	InterPro:eRF1_3	SEG:seg	:	:

Description

AT5G47880 (E=6e-032) ERF1-1 | ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1); translation release factor

Coordinates

chrA02:-:23489915..23491265

Molecular Weight (calculated)

29954.8 Da

IEP (calculated)

8.669

GRAVY (calculated)

-0.624

Length

260 amino acids

Sequence
(BLAST)

001: MGDNQQYDKS IEIWKMKKLI KSLEAPKGNG TSMIVNRLSV LGAITSAQQR LKRYNRVPPN GLVLYTGTIV NEEGKEKKVT IDFEPFRPIN NTLYLCDNKF
101: HTEANEYRRF GCALEFVTNK SQEGDKFCKG FGGVGGILRY QLDVADFDEE EDLDVLLYVN GLTDWLEKKF EQIKISNLRK LDLAKTLIDR EAKTYVNQSR
201: LRYRSWDSLK AALLFRFGDE DDPERLMLRE RSRRFIDRCC QNKAHGEAAK LQSTEAIGSS

Best Arabidopsis Sequence Match ( AT5G47880.1 )
(BLAST)

001: MGDKNDDDKN IEIWKIKKLI KSLEAARGNG TSMISLIMPP RDQVSRVTKM LGDEYGTASN IKSRVNRQSV LGAITSAQQR LKLYNRVPPN GLVLYTGTIV
101: NEDGKEKKVT IDFEPFRPIN ASLYLCDNKF HTEALNELLE SDDKFGFIVM DGNGTLFGTL SGNTREVLHK FSVDLPKKHG RGGQSALRFA RLRMEKRHNY
201: VRKTAELATQ YYINPATSQP NVSGLILAGS ADFKTELSQS DMFDPRLAAK ILNVVDVSYG GENGFNQAIE LSAEILANVK FIQEKRLIGK YFEEISQDTG
301: KYVFGVEDTL NALESGAIET LIVWENLDIN RYVMKNSATG ETVIKHLNKE QEANTENFKV ADSDLALDVE EKLSLLEWLA NEYRRFGCAL EFVTNKSQEG
401: SQFCRGFGGI GGILRYQLDM TAFDSEDGEA LDDDSE

Arabidopsis Description

ERF1-1ERF1-1 [Source:UniProtKB/TrEMBL;Acc:A0A178UFY7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.