Factsheet for Zm00001d037868_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU77890	Sorghum	cytosol	96.8	92.98
Os05t0373900-01	Rice	cytosol, plasma membrane	88.81	88.41
TraesCS1B01G248600.1	Wheat	cytosol	85.39	85.0
HORVU1Hr1G057880.1	Barley	cytosol	85.39	84.81
TraesCS1D01G237100.1	Wheat	cytosol	85.39	84.81
TraesCS1A01G235000.1	Wheat	cytosol	84.02	83.07
GSMUA_Achr6P10000_001	Banana	cytosol	52.74	81.34
GSMUA_Achr10P...	Banana	cytosol	51.6	81.0
Zm00001d013481_P001	Maize	cytosol, extracellular	78.77	78.95
Zm00001d006725_P001	Maize	cytosol, extracellular	77.4	77.57
GSMUA_Achr10P...	Banana	cytosol	12.33	54.0
Zm00001d021144_P001	Maize	cytosol	16.67	41.01
Bra020726.1-P	Field mustard	cytosol	23.97	40.38
CDY45916	Canola	cytosol	23.97	40.38

Protein Annotations

EntrezGene:100281195	MapMan:17.3.2.1.1	Gene3D:3.30.1330.30	Gene3D:3.30.420.60	Gene3D:3.30.960.10	UniProt:A0A1D6M1D4
ProteinID:AQK85053.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003747	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006412	GO:GO:0006415
GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043
GO:GO:0019538	InterPro:IPR024049	InterPro:IPR029064	InterPro:L30e-like	PFAM:PF03463	PFAM:PF03464
PFAM:PF03465	PANTHER:PTHR10113	PANTHER:PTHR10113:SF11	InterPro:Peptide_chain-rel_eRF1/aRF1	InterPro:Release_factor_eRF1/aRF1_N	SMART:SM01194
SUPFAM:SSF53137	SUPFAM:SSF55315	SUPFAM:SSF55481	TIGRFAMs:TIGR03676	UniParc:UPI000220ACE5	EnsemblPlantsGene:Zm00001d037868
EnsemblPlants:Zm00001d037868_P001	EnsemblPlants:Zm00001d037868_T001	InterPro:eRF1_1_Pelota	InterPro:eRF1_2	InterPro:eRF1_3	:

Description

Eukaryotic peptide chain release factor subunit 1-1

Coordinates

chr6:-:140460105..140461421

Molecular Weight (calculated)

48887.9 Da

IEP (calculated)

4.847

GRAVY (calculated)

-0.368

Length

438 amino acids

Sequence
(BLAST)

001: MGEVHEADKN IEIWRVKKLI KALDAARGNG TSMISLIMPP RDQIARVTKM LGDEYGTASN IKSRVNRQSV LAAITSAQQR LKLYSRVPPN GLVLYTGTIV
101: TDDGKEKKVT FDFEPFRPIN ASLYLCDNKF HTESLNELLT SDDKFGFIII DGNGTLYGTL SGNSREVLYK FSVDLPKKHG RGGQSAVRFA RLRMERRHNY
201: LRKVAELATQ YFINPGTNQP NIVGLILAGS ADFKSELGKS EMFDPRLQAK VVKMIDVSYG GDSGFNQAIE MSAEVLSDVK FVQEKKLIGK YFEEISQDTG
301: KYVLGIQDTI TALEMGAVEI LIVWENLDVR RYELKNSATG ETVVKYLNPA QEADQSNFTD EATSGDLEVI DNTQLLEWFA ENYHQFGCTL EFVTNKSQEG
401: SQFCRGFGGI GGILRYPADV SAYQDGDLSD GEYDEDLE

Best Arabidopsis Sequence Match ( AT3G26618.1 )
(BLAST)

001: MADQESDKNI EIWKIKKLIK GLETARGNGT SMISLIMPPR DQVARVTKML ADEYGTASNI KSRVNRQSVL SAITSAQQRL KLYNKVPPNG LVLYTGTIVT
101: DDGKEKKVTI DFEPFKPINA SLYLCDNKFH TEPLNELLES DDKFGFIVMD GNGTLFGTLS GNTREVLHKF TVDLPKKHGR GGQSALRFAR LRMEKRHNYV
201: RKTAELATQF YINPATSQPN VSGLILAGSA DFKTELSQSE LFDPRLQAKI LNVVDVSYGG ENGFNQAIEL SAEILSNVKF IQEKKLIGKY FEEISQDTGK
301: YVFGVEDTLK ALEMGAVETL IVWENLDINR YELKNNTTGE IVIKHLGKDQ ENNQSNFHDA ETNAELEVQE KMPLLEWFAN EYKRFGCTLE FVTNKSQEGS
401: QFCRGFGGIG GLLRYQLDMR TFDELSDGEV YEDSD

Arabidopsis Description

ERF1-3ERF1-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VIS2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.