Factsheet for HORVU1Hr1G057880.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G248600.1	Wheat	cytosol	95.24	95.45
TraesCS1D01G237100.1	Wheat	cytosol	94.78	94.78
TraesCS1A01G235000.1	Wheat	cytosol	93.42	93.0
Os05t0373900-01	Rice	cytosol, plasma membrane	89.12	89.32
GSMUA_Achr10P...	Banana	cytosol	54.42	86.02
GSMUA_Achr6P10000_001	Banana	cytosol	55.1	85.56
Zm00001d037868_P001	Maize	cytosol	84.81	85.39
HORVU3Hr1G104360.1	Barley	cytosol	82.09	83.03
OQU77890	Sorghum	cytosol	85.26	82.46
HORVU4Hr1G006500.2	Barley	cytosol	78.91	78.73
HORVU2Hr1G035400.1	Barley	cytosol	78.0	72.57
HORVU3Hr1G104200.2	Barley	cytosol	69.61	69.93
HORVU3Hr1G060530.4	Barley	cytosol	29.02	52.67
GSMUA_Achr10P...	Banana	cytosol	11.11	49.0
HORVU3Hr1G046830.1	Barley	mitochondrion	8.62	46.91
Bra020726.1-P	Field mustard	cytosol	24.94	42.31
CDY45916	Canola	cytosol	24.94	42.31

Protein Annotations

MapMan:17.3.2.1.1	Gene3D:3.30.1330.30	Gene3D:3.30.420.60	Gene3D:3.30.960.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003747	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006412	GO:GO:0006415	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	EnsemblPlantsGene:HORVU1Hr1G057880	EnsemblPlants:HORVU1Hr1G057880.1
InterPro:IPR024049	InterPro:IPR029064	InterPro:L30e-like	UniProt:M0W8S9	PFAM:PF03463	PFAM:PF03464
PFAM:PF03465	PANTHER:PTHR10113	PANTHER:PTHR10113:SF11	InterPro:Peptide_chain-rel_eRF1/aRF1	InterPro:Release_factor_eRF1/aRF1_N	SMART:SM01194
SUPFAM:SSF53137	SUPFAM:SSF55315	SUPFAM:SSF55481	TIGRFAMs:TIGR03676	UniParc:UPI000295BACB	InterPro:eRF1_1_Pelota
InterPro:eRF1_2	InterPro:eRF1_3	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:422078844..422081902

Molecular Weight (calculated)

49281.5 Da

IEP (calculated)

4.767

GRAVY (calculated)

-0.336

Length

441 amino acids

Sequence
(BLAST)

001: MVEGFETDKN IEIWKVKKLI KGLDAARGNG TSMISLIMPP RDQVSRVAKM LGDEYGTASN IKSRVNRQSV LAAITSAQQR LKLYSRVPPN GLVLYTGTVV
101: TDDGKEKKVT FDFEPFRPIN ASLYLCDNKF HTEALNELLE SDDKFGFIII DGNGTLYGTL SGNSREVLYK FTVDLPKKHG RGGQSALRFA RLRMEKRHNY
201: LRKVAELATH FFINPATHQP NVVGLILAGS ADFKTELGKS DMFDQRLQAK VIKSVDVSYG GESGFNQAIE MSVEVLSEVK FVQEKKLLGK YFEEISQDTG
301: KYVLGVQDTM AALELGAVDT LIVWESLDVR RYELKNPATG EAVVKYLNGG QEADQSNFVD EATCGELDVV DRVLLLEWFA ENYRQYGCKL EFVTNRSQEG
401: SQFCRGFGGI GGILRYPADV AAYDDDDDDD MLDDDVYEGF E

Best Arabidopsis Sequence Match ( AT1G12920.1 )
(BLAST)

001: MAEEADTNIE IWKIKKLIKG LESARGNGTS MISLIMPPRD QVSRVTKMLG DEYGTASNIK SRVNRQSVLS AITSAQQRLK LYNKVPTNGL VLYTGTIVND
101: DGKEKKVTFD FEPFRPINAS LYLCDNKFHT EALNELLESD DKFGFIVMDG NGTLFGTLSG NTREVLHKFT VDLPKKHGRG GQSALRFARL RMEKRHNYVR
201: KTAELATQFY INPATSQPNV SGLILAGSAD FKTELSQSEL FDPRLQAKIL NVVDVSYGGE NGFNQAIELS AEILSNVKFI QEKKLIGKYF EEISQDTGKY
301: VFGVEDTLKA LEMGAIETLI VWENLDINRY ELKNSTTGEM VVKHFGKDQE SDTSNFHDSE TNAELEVQEK MPLLEWFANE YKRFGCTLEF VTNKSQEGSQ
401: FCRGFGGIGG MLRYQLDMRT FDELSDTEVY EDSD

Arabidopsis Description

ERF1-2Eukaryotic peptide chain release factor subunit 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPV8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.