Factsheet for HORVU3Hr1G046830.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g006130.1.1	Tomato	cytosol, nucleus	51.85	10.37
Solyc12g010520.1.1	Tomato	nucleus	50.62	10.12
VIT_18s0072g01010.t01	Wine grape	cytosol	53.09	9.84
VIT_18s0041g00730.t01	Wine grape	cytosol	53.09	9.84
HORVU3Hr1G104360.1	Barley	cytosol	51.85	9.63
PGSC0003DMT400029003	Potato	cytosol	51.85	9.61
KRH09439	Soybean	cytosol	51.85	9.61
PGSC0003DMT400028999	Potato	cytosol	51.85	9.61
PGSC0003DMT400020395	Potato	cytosol	50.62	9.38
KRH38906	Soybean	endoplasmic reticulum	51.85	9.31
HORVU4Hr1G006500.2	Barley	cytosol	50.62	9.28
VIT_18s0001g12240.t01	Wine grape	mitochondrion	53.09	9.19
HORVU2Hr1G035400.1	Barley	cytosol	51.85	8.86
HORVU3Hr1G104200.2	Barley	cytosol	46.91	8.66
HORVU1Hr1G057880.1	Barley	cytosol	46.91	8.62
HORVU3Hr1G060530.4	Barley	cytosol	14.81	4.94
CDY14497	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.30.420.60	MapMan:35.2	UniProt:A0A287KY17	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003747	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006412	GO:GO:0006415	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	EnsemblPlantsGene:HORVU3Hr1G046830	EnsemblPlants:HORVU3Hr1G046830.1	PFAM:PF03464
PANTHER:PTHR10113	PANTHER:PTHR10113:SF19	InterPro:Peptide_chain-rel_eRF1/aRF1	SUPFAM:SSF53137	SignalP:SignalP-noTM	UniParc:UPI000B48032B
InterPro:eRF1_2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:313481469..313481713

Molecular Weight (calculated)

9277.5 Da

IEP (calculated)

12.162

GRAVY (calculated)

-0.272

Length

81 amino acids

Sequence
(BLAST)

1: PRRLADCGAC PVALWLRLLP STHASLRIVV LRRLSTAQGN GRFPEKHGRR GQSALCFARL RMEMRHNYVR KTTEVGTQFF I

Best Arabidopsis Sequence Match ( AT1G12920.1 )
(BLAST)

001: MAEEADTNIE IWKIKKLIKG LESARGNGTS MISLIMPPRD QVSRVTKMLG DEYGTASNIK SRVNRQSVLS AITSAQQRLK LYNKVPTNGL VLYTGTIVND
101: DGKEKKVTFD FEPFRPINAS LYLCDNKFHT EALNELLESD DKFGFIVMDG NGTLFGTLSG NTREVLHKFT VDLPKKHGRG GQSALRFARL RMEKRHNYVR
201: KTAELATQFY INPATSQPNV SGLILAGSAD FKTELSQSEL FDPRLQAKIL NVVDVSYGGE NGFNQAIELS AEILSNVKFI QEKKLIGKYF EEISQDTGKY
301: VFGVEDTLKA LEMGAIETLI VWENLDINRY ELKNSTTGEM VVKHFGKDQE SDTSNFHDSE TNAELEVQEK MPLLEWFANE YKRFGCTLEF VTNKSQEGSQ
401: FCRGFGGIGG MLRYQLDMRT FDELSDTEVY EDSD

Arabidopsis Description

ERF1-2Eukaryotic peptide chain release factor subunit 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPV8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.