Factsheet for HORVU3Hr1G060530.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06769	Soybean	mitochondrion	52.26	34.42
HORVU3Hr1G104200.2	Barley	cytosol	61.32	33.94
HORVU3Hr1G104360.1	Barley	cytosol	60.08	33.49
GSMUA_Achr6P09990_001	Banana	cytosol	11.52	33.33
Zm00001d021144_P001	Maize	cytosol	23.05	31.46
GSMUA_Achr10P...	Banana	cytosol	11.52	31.46
KRH70101	Soybean	cytosol	53.91	29.98
KRH08442	Soybean	cytosol, nucleus	52.67	29.36
Solyc05g055210.1.1	Tomato	plastid	52.26	29.06
PGSC0003DMT400060405	Potato	cytosol	52.26	29.06
HORVU1Hr1G057880.1	Barley	cytosol	52.67	29.02
PGSC0003DMT400019675	Potato	cytosol	51.85	28.83
Solyc11g006660.1.1	Tomato	nucleus	51.44	28.6
HORVU4Hr1G006500.2	Barley	cytosol	51.85	28.51
CDX98026	Canola	cytosol	16.05	27.86
HORVU2Hr1G035400.1	Barley	cytosol	53.09	27.22
KRG94758	Soybean	cytosol, endoplasmic reticulum	35.39	24.78
Bra019799.1-P	Field mustard	cytosol	9.88	23.3
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	44.44	19.67
GSMUA_Achr8P09860_001	Banana	cytosol	23.46	18.45
GSMUA_Achr10P...	Banana	cytosol	18.93	16.2
HORVU3Hr1G046830.1	Barley	mitochondrion	4.94	14.81

Protein Annotations

Gene3D:3.30.1330.30	Gene3D:3.30.420.60	MapMan:35.1	UniProt:A0A287L9A7	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003747	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006412	GO:GO:0006415	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	EnsemblPlantsGene:HORVU3Hr1G060530	EnsemblPlants:HORVU3Hr1G060530.4
InterPro:IPR029064	InterPro:L30e-like	PFAM:PF03465	PANTHER:PTHR10113	PANTHER:PTHR10113:SF14	InterPro:Peptide_chain-rel_eRF1/aRF1
SUPFAM:SSF55315	UniParc:UPI000B47A738	InterPro:eRF1_3	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr3H:-:461250925..461252476

Molecular Weight (calculated)

26872.8 Da

IEP (calculated)

5.423

GRAVY (calculated)

-0.309

Length

243 amino acids

Sequence
(BLAST)

001: RSRVLTEHLR PGVDPVSRSN LDLQRTATSC PAPTNPGDTR SGVAPAGDWE DQDGVPAAAA LRRRPPLLRQ ELCPGVRHQG AAAKILKVVT VSHGGEDGFN
101: QAIEISVEVL SSVKFIQEKK LIGKYFEEIS LDTGKYVFGV DDTMSALEMG AVETLIVWEN LDINRYILKN YATGETVVKH FNTAQEADSS NFEDEATSAD
201: VEVVKRTLLL EWFAENYRKF GCAWSSSRIM RRKDLSSVWA MVG

Best Arabidopsis Sequence Match ( AT1G12920.1 )
(BLAST)

001: MAEEADTNIE IWKIKKLIKG LESARGNGTS MISLIMPPRD QVSRVTKMLG DEYGTASNIK SRVNRQSVLS AITSAQQRLK LYNKVPTNGL VLYTGTIVND
101: DGKEKKVTFD FEPFRPINAS LYLCDNKFHT EALNELLESD DKFGFIVMDG NGTLFGTLSG NTREVLHKFT VDLPKKHGRG GQSALRFARL RMEKRHNYVR
201: KTAELATQFY INPATSQPNV SGLILAGSAD FKTELSQSEL FDPRLQAKIL NVVDVSYGGE NGFNQAIELS AEILSNVKFI QEKKLIGKYF EEISQDTGKY
301: VFGVEDTLKA LEMGAIETLI VWENLDINRY ELKNSTTGEM VVKHFGKDQE SDTSNFHDSE TNAELEVQEK MPLLEWFANE YKRFGCTLEF VTNKSQEGSQ
401: FCRGFGGIGG MLRYQLDMRT FDELSDTEVY EDSD

Arabidopsis Description

ERF1-2Eukaryotic peptide chain release factor subunit 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPV8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.