Factsheet for Bra019799.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98026	Canola	cytosol	78.64	57.86
GSMUA_Achr10P...	Banana	cytosol	11.65	13.48
HORVU3Hr1G060530.4	Barley	cytosol	23.3	9.88
KRH06769	Soybean	mitochondrion	34.95	9.76
Bra016748.1-P	Field mustard	cytosol	35.92	8.51
KRH70101	Soybean	cytosol	34.95	8.24
KRG94758	Soybean	cytosol, endoplasmic reticulum	27.18	8.07
Bra034244.1-P	Field mustard	cytosol	33.98	8.05
KRH08442	Soybean	cytosol, nucleus	33.98	8.03
PGSC0003DMT400019675	Potato	cytosol	33.98	8.01
Solyc11g006660.1.1	Tomato	nucleus	33.01	7.78
PGSC0003DMT400060405	Potato	cytosol	31.07	7.32
Solyc05g055210.1.1	Tomato	plastid	31.07	7.32
Bra037523.1-P	Field mustard	cytosol	30.1	7.14
Bra020726.1-P	Field mustard	cytosol	13.59	5.38
Zm00001d021144_P001	Maize	cytosol	8.74	5.06
GSMUA_Achr10P...	Banana	cytosol	9.71	3.52

Protein Annotations

Gene3D:3.30.1330.30	MapMan:35.2	EnsemblPlantsGene:Bra019799	EnsemblPlants:Bra019799.1	EnsemblPlants:Bra019799.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003747	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006412	GO:GO:0006415	GO:GO:0008135	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	InterPro:IPR029064
InterPro:L30e-like	UniProt:M4DTF6	PANTHER:PTHR10113	PANTHER:PTHR10113:SF19	InterPro:Peptide_chain-rel_eRF1/aRF1	SUPFAM:SSF55315
UniParc:UPI000253EC68	SEG:seg	:	:	:	:

Description

AT3G26618 (E=4e-010) ERF1-3 | ERF1-3 (eukaryotic release factor 1-3); translation release factor

Coordinates

chrA06:+:4361791..4362498

Molecular Weight (calculated)

11637.1 Da

IEP (calculated)

4.656

GRAVY (calculated)

-0.250

Length

103 amino acids

Sequence
(BLAST)

001: MVMNTELLPT SRVVSTGTIV NDDGKDKKSK FDFEPFRPAL EMGAIETLIK ALEMGTIETL IVWENLDINR CELKNNTIWR SSGEALWERL IKATSMTQSP
101: TMS

Best Arabidopsis Sequence Match ( AT3G26618.1 )
(BLAST)

001: MADQESDKNI EIWKIKKLIK GLETARGNGT SMISLIMPPR DQVARVTKML ADEYGTASNI KSRVNRQSVL SAITSAQQRL KLYNKVPPNG LVLYTGTIVT
101: DDGKEKKVTI DFEPFKPINA SLYLCDNKFH TEPLNELLES DDKFGFIVMD GNGTLFGTLS GNTREVLHKF TVDLPKKHGR GGQSALRFAR LRMEKRHNYV
201: RKTAELATQF YINPATSQPN VSGLILAGSA DFKTELSQSE LFDPRLQAKI LNVVDVSYGG ENGFNQAIEL SAEILSNVKF IQEKKLIGKY FEEISQDTGK
301: YVFGVEDTLK ALEMGAVETL IVWENLDINR YELKNNTTGE IVIKHLGKDQ ENNQSNFHDA ETNAELEVQE KMPLLEWFAN EYKRFGCTLE FVTNKSQEGS
401: QFCRGFGGIG GLLRYQLDMR TFDELSDGEV YEDSD

Arabidopsis Description

ERF1-3ERF1-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VIS2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.