Factsheet for Bra034244.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56364	Canola	cytosol	100.0	100.0
AT3G26618.1	Thale cress	cytosol	97.7	97.7
Bra016748.1-P	Field mustard	cytosol	94.25	94.25
Zm00001d013481_P001	Maize	cytosol, extracellular	91.03	90.62
Os03t0702800-01	Rice	cytosol, plasma membrane	90.8	90.39
EER93602	Sorghum	cytosol	90.57	90.16
TraesCS2A01G192900.1	Wheat	cytosol	90.57	90.16
EER99630	Sorghum	cytosol	90.34	89.93
TraesCS2B01G213800.1	Wheat	cytosol	90.34	89.93
Os07t0587400-01	Rice	cytosol	90.11	89.7
Zm00001d006725_P001	Maize	cytosol, extracellular	90.11	89.7
TraesCS4A01G273100.1	Wheat	cytosol	88.74	88.33
TraesCS4B01G040900.1	Wheat	cytosol	88.74	88.33
TraesCS4D01G038300.1	Wheat	cytosol	88.74	88.33
HORVU4Hr1G006500.2	Barley	cytosol	88.97	87.56
Bra037523.1-P	Field mustard	cytosol	85.75	85.94
HORVU2Hr1G035400.1	Barley	cytosol	89.66	82.28
Bra020726.1-P	Field mustard	cytosol	25.29	42.31
Bra019799.1-P	Field mustard	cytosol	8.05	33.98

Protein Annotations

MapMan:17.3.2.1.1	Gene3D:3.30.1330.30	Gene3D:3.30.420.60	Gene3D:3.30.960.10	EnsemblPlantsGene:Bra034244	EnsemblPlants:Bra034244.1
EnsemblPlants:Bra034244.1-P	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003747	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006412	GO:GO:0006415
GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043
GO:GO:0019538	InterPro:IPR024049	InterPro:IPR029064	InterPro:L30e-like	UniProt:M4EZK1	PFAM:PF03463
PFAM:PF03464	PFAM:PF03465	PANTHER:PTHR10113	PANTHER:PTHR10113:SF19	InterPro:Peptide_chain-rel_eRF1/aRF1	InterPro:Release_factor_eRF1/aRF1_N
SMART:SM01194	SUPFAM:SSF53137	SUPFAM:SSF55315	SUPFAM:SSF55481	TIGRFAMs:TIGR03676	UniParc:UPI0002543819
InterPro:eRF1_1_Pelota	InterPro:eRF1_2	InterPro:eRF1_3	:	:	:

Description

AT3G26618 (E=7e-247) ERF1-3 | ERF1-3 (eukaryotic release factor 1-3); translation release factor

Coordinates

chrA01:-:26770387..26771694

Molecular Weight (calculated)

48826.0 Da

IEP (calculated)

5.079

GRAVY (calculated)

-0.428

Length

435 amino acids

Sequence
(BLAST)

001: MAEQESDKNI EIWKIKKLIK GLESARGNGT SMISLIMPPR DQVARVTKML ADEYGTASNI KSRVNRQSVL SAITSAQQRL KLYNKVPPNG LVLYTGTIVT
101: DDGKEKKVTI DFEPFKPINA SLYLCDNKFH TEPLNELLES DDKFGFIVMD GNGTLFGTLS GNTREVLHKF TVDLPKKHGR GGQSALRFAR LRMEKRHNYV
201: RKTAELATQF YINPATSQPN VSGLILAGSA DFKTELSQSE LFDPRLQAKI LNVVDVSYGG ENGFNQAIEL SAEILSNVKF IQEKKLIGKY FEEISQDTGK
301: YVFGVDDTLK ALDMGAVETL IVWENLDINR YELKNGATGE IVIKHLGKDQ ENDQSNFHDA ESSAELEVVE KMPLLEWFAN EYKRFGCTLE FVTNKSQEGS
401: QFCRGFGGIG GLLRYQLDMR TFDELSDGEV YEDSD

Best Arabidopsis Sequence Match ( AT3G26618.1 )
(BLAST)

001: MADQESDKNI EIWKIKKLIK GLETARGNGT SMISLIMPPR DQVARVTKML ADEYGTASNI KSRVNRQSVL SAITSAQQRL KLYNKVPPNG LVLYTGTIVT
101: DDGKEKKVTI DFEPFKPINA SLYLCDNKFH TEPLNELLES DDKFGFIVMD GNGTLFGTLS GNTREVLHKF TVDLPKKHGR GGQSALRFAR LRMEKRHNYV
201: RKTAELATQF YINPATSQPN VSGLILAGSA DFKTELSQSE LFDPRLQAKI LNVVDVSYGG ENGFNQAIEL SAEILSNVKF IQEKKLIGKY FEEISQDTGK
301: YVFGVEDTLK ALEMGAVETL IVWENLDINR YELKNNTTGE IVIKHLGKDQ ENNQSNFHDA ETNAELEVQE KMPLLEWFAN EYKRFGCTLE FVTNKSQEGS
401: QFCRGFGGIG GLLRYQLDMR TFDELSDGEV YEDSD

Arabidopsis Description

ERF1-3ERF1-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VIS2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.