Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034244.1-P | Field mustard | cytosol | 97.7 | 97.7 |
| CDY56364 | Canola | cytosol | 97.7 | 97.7 |
| CDY00188 | Canola | cytosol | 97.24 | 97.24 |
| AT1G12920.1 | Thale cress | cytosol | 94.71 | 94.93 |
| GSMUA_Achr8P09860_001 | Banana | cytosol | 66.21 | 93.2 |
| KRH70101 | Soybean | cytosol | 93.1 | 92.68 |
| GSMUA_Achr10P... | Banana | cytosol | 59.77 | 91.55 |
| KRH08442 | Soybean | cytosol, nucleus | 91.72 | 91.51 |
| Solyc12g010520.1.1 | Tomato | nucleus | 85.06 | 91.36 |
| VIT_18s0041g00730.t01 | Wine grape | cytosol | 91.72 | 91.3 |
| KRH06769 | Soybean | mitochondrion | 77.24 | 91.06 |
| Zm00001d013481_P001 | Maize | cytosol, extracellular | 91.26 | 90.85 |
| PGSC0003DMT400020395 | Potato | cytosol | 91.26 | 90.85 |
| Os03t0702800-01 | Rice | cytosol, plasma membrane | 91.03 | 90.62 |
| EER93602 | Sorghum | cytosol | 91.03 | 90.62 |
| Zm00001d006725_P001 | Maize | cytosol, extracellular | 90.8 | 90.39 |
| EER99630 | Sorghum | cytosol | 90.8 | 90.39 |
| TraesCS2A01G192900.1 | Wheat | cytosol | 90.57 | 90.16 |
| Solyc07g006130.1.1 | Tomato | cytosol, nucleus | 83.91 | 90.12 |
| TraesCS2B01G213800.1 | Wheat | cytosol | 90.34 | 89.93 |
| Os07t0587400-01 | Rice | cytosol | 89.89 | 89.47 |
| PGSC0003DMT400028999 | Potato | cytosol | 89.89 | 89.47 |
| PGSC0003DMT400029003 | Potato | cytosol | 89.89 | 89.47 |
| KRH09439 | Soybean | cytosol | 89.66 | 89.24 |
| VIT_18s0072g01010.t01 | Wine grape | cytosol | 89.2 | 88.79 |
| TraesCS4B01G040900.1 | Wheat | cytosol | 88.97 | 88.56 |
| TraesCS4A01G273100.1 | Wheat | cytosol | 88.97 | 88.56 |
| TraesCS4D01G038300.1 | Wheat | cytosol | 88.97 | 88.56 |
| PGSC0003DMT400019675 | Potato | cytosol | 88.28 | 87.87 |
| HORVU4Hr1G006500.2 | Barley | cytosol | 89.2 | 87.78 |
| PGSC0003DMT400060405 | Potato | cytosol | 88.05 | 87.64 |
| Solyc11g006660.1.1 | Tomato | nucleus | 88.05 | 87.64 |
| Solyc05g055210.1.1 | Tomato | plastid | 87.82 | 87.41 |
| KRH38906 | Soybean | endoplasmic reticulum | 90.11 | 86.92 |
| KRG94758 | Soybean | cytosol, endoplasmic reticulum | 68.97 | 86.46 |
| AT5G47880.1 | Thale cress | cytosol | 85.98 | 85.78 |
| GSMUA_Achr6P09990_001 | Banana | cytosol | 16.32 | 84.52 |
| VIT_18s0001g12240.t01 | Wine grape | mitochondrion | 90.8 | 84.4 |
| HORVU2Hr1G035400.1 | Barley | cytosol | 89.89 | 82.49 |
| GSMUA_Achr10P... | Banana | cytosol | 16.09 | 78.65 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 85.29 | 67.58 |
Protein Annotations
| MapMan:17.3.2.1.1 | Gene3D:3.30.1330.30 | Gene3D:3.30.420.60 | Gene3D:3.30.960.10 | EntrezGene:822273 | UniProt:A0A178VIS2 |
| ProteinID:AEE77187.1 | ArrayExpress:AT3G26618 | EnsemblPlantsGene:AT3G26618 | RefSeq:AT3G26618 | TAIR:AT3G26618 | RefSeq:AT3G26618-TAIR-G |
| EnsemblPlants:AT3G26618.1 | TAIR:AT3G26618.1 | EMBL:AY050352 | EMBL:AY116942 | ProteinID:BAB01727.1 | ProteinID:CAA49172.1 |
| ProteinID:CAA66813.1 | Symbol:ERF1-3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003747 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006412 |
| GO:GO:0006415 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0019538 | GO:GO:0040007 | GO:GO:0040008 | InterPro:IPR024049 | InterPro:IPR029064 |
| InterPro:L30e-like | RefSeq:NP_189295.3 | ProteinID:OAP06267.1 | UniProt:P35614 | PFAM:PF03463 | PFAM:PF03464 |
| PFAM:PF03465 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0009025 | PO:PO:0025195 | PO:PO:0025281 |
| PANTHER:PTHR10113 | PANTHER:PTHR10113:SF19 | InterPro:Peptide_chain-rel_eRF1/aRF1 | InterPro:Release_factor_eRF1/aRF1_N | SMART:SM01194 | SUPFAM:SSF53137 |
| SUPFAM:SSF55315 | SUPFAM:SSF55481 | TIGRFAMs:TIGR03676 | UniParc:UPI0000000BB9 | EMBL:X97486 | InterPro:eRF1_1_Pelota |
| InterPro:eRF1_2 | InterPro:eRF1_3 | : | : | : | : |
Description
ERF1-3ERF1-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VIS2]
Coordinates
chr3:+:9788231..9790451
Molecular Weight (calculated)
49010.2 Da
IEP (calculated)
5.171
GRAVY (calculated)
-0.465
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MADQESDKNI EIWKIKKLIK GLETARGNGT SMISLIMPPR DQVARVTKML ADEYGTASNI KSRVNRQSVL SAITSAQQRL KLYNKVPPNG LVLYTGTIVT
101: DDGKEKKVTI DFEPFKPINA SLYLCDNKFH TEPLNELLES DDKFGFIVMD GNGTLFGTLS GNTREVLHKF TVDLPKKHGR GGQSALRFAR LRMEKRHNYV
201: RKTAELATQF YINPATSQPN VSGLILAGSA DFKTELSQSE LFDPRLQAKI LNVVDVSYGG ENGFNQAIEL SAEILSNVKF IQEKKLIGKY FEEISQDTGK
301: YVFGVEDTLK ALEMGAVETL IVWENLDINR YELKNNTTGE IVIKHLGKDQ ENNQSNFHDA ETNAELEVQE KMPLLEWFAN EYKRFGCTLE FVTNKSQEGS
401: QFCRGFGGIG GLLRYQLDMR TFDELSDGEV YEDSD
101: DDGKEKKVTI DFEPFKPINA SLYLCDNKFH TEPLNELLES DDKFGFIVMD GNGTLFGTLS GNTREVLHKF TVDLPKKHGR GGQSALRFAR LRMEKRHNYV
201: RKTAELATQF YINPATSQPN VSGLILAGSA DFKTELSQSE LFDPRLQAKI LNVVDVSYGG ENGFNQAIEL SAEILSNVKF IQEKKLIGKY FEEISQDTGK
301: YVFGVEDTLK ALEMGAVETL IVWENLDINR YELKNNTTGE IVIKHLGKDQ ENNQSNFHDA ETNAELEVQE KMPLLEWFAN EYKRFGCTLE FVTNKSQEGS
401: QFCRGFGGIG GLLRYQLDMR TFDELSDGEV YEDSD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.