Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016748.1-P | Field mustard | cytosol | 97.93 | 97.7 |
| CDY21074 | Canola | cytosol | 97.93 | 97.7 |
| CDY34600 | Canola | cytosol | 37.1 | 96.41 |
| AT3G26618.1 | Thale cress | cytosol | 94.93 | 94.71 |
| GSMUA_Achr8P09860_001 | Banana | cytosol | 65.9 | 92.56 |
| Solyc12g010520.1.1 | Tomato | nucleus | 85.25 | 91.36 |
| KRH70101 | Soybean | cytosol | 90.78 | 90.16 |
| PGSC0003DMT400020395 | Potato | cytosol | 90.78 | 90.16 |
| GSMUA_Achr10P... | Banana | cytosol | 58.99 | 90.14 |
| EER93602 | Sorghum | cytosol | 90.55 | 89.93 |
| TraesCS2B01G213800.1 | Wheat | cytosol | 90.55 | 89.93 |
| TraesCS2A01G192900.1 | Wheat | cytosol | 90.55 | 89.93 |
| Zm00001d013481_P001 | Maize | cytosol, extracellular | 90.32 | 89.7 |
| VIT_18s0041g00730.t01 | Wine grape | cytosol | 90.32 | 89.7 |
| KRH08442 | Soybean | cytosol, nucleus | 90.09 | 89.68 |
| Solyc07g006130.1.1 | Tomato | cytosol, nucleus | 83.64 | 89.63 |
| Os03t0702800-01 | Rice | cytosol, plasma membrane | 90.09 | 89.47 |
| Zm00001d006725_P001 | Maize | cytosol, extracellular | 89.86 | 89.24 |
| EER99630 | Sorghum | cytosol | 89.86 | 89.24 |
| KRH06769 | Soybean | mitochondrion | 75.81 | 89.16 |
| Os07t0587400-01 | Rice | cytosol | 89.4 | 88.79 |
| KRH09439 | Soybean | cytosol | 89.4 | 88.79 |
| PGSC0003DMT400028999 | Potato | cytosol | 89.17 | 88.56 |
| PGSC0003DMT400029003 | Potato | cytosol | 89.17 | 88.56 |
| VIT_18s0072g01010.t01 | Wine grape | cytosol | 88.48 | 87.87 |
| TraesCS4D01G038300.1 | Wheat | cytosol | 88.02 | 87.41 |
| TraesCS4B01G040900.1 | Wheat | cytosol | 88.02 | 87.41 |
| TraesCS4A01G273100.1 | Wheat | cytosol | 88.02 | 87.41 |
| HORVU4Hr1G006500.2 | Barley | cytosol | 88.25 | 86.65 |
| PGSC0003DMT400060405 | Potato | cytosol | 86.87 | 86.27 |
| KRH38906 | Soybean | endoplasmic reticulum | 89.63 | 86.25 |
| Solyc11g006660.1.1 | Tomato | nucleus | 86.64 | 86.04 |
| Solyc05g055210.1.1 | Tomato | plastid | 86.64 | 86.04 |
| PGSC0003DMT400019675 | Potato | cytosol | 86.64 | 86.04 |
| AT5G47880.1 | Thale cress | cytosol | 85.94 | 85.55 |
| KRG94758 | Soybean | cytosol, endoplasmic reticulum | 67.97 | 85.01 |
| VIT_18s0001g12240.t01 | Wine grape | mitochondrion | 90.32 | 83.76 |
| GSMUA_Achr6P09990_001 | Banana | cytosol | 16.13 | 83.33 |
| HORVU2Hr1G035400.1 | Barley | cytosol | 89.86 | 82.28 |
| GSMUA_Achr10P... | Banana | cytosol | 15.9 | 77.53 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 85.02 | 67.21 |
Protein Annotations
| MapMan:17.3.2.1.1 | Gene3D:3.30.1330.30 | Gene3D:3.30.420.60 | Gene3D:3.30.960.10 | EntrezGene:837850 | UniProt:A0A178W3T8 |
| ProteinID:AAF78496.1 | ProteinID:AEE28949.1 | ArrayExpress:AT1G12920 | EnsemblPlantsGene:AT1G12920 | RefSeq:AT1G12920 | TAIR:AT1G12920 |
| RefSeq:AT1G12920-TAIR-G | EnsemblPlants:AT1G12920.1 | TAIR:AT1G12920.1 | EMBL:AY034963 | EMBL:AY086623 | Unigene:At.23958 |
| EMBL:BT026125 | Symbol:ERF1-2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003747 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0005886 | GO:GO:0006412 | GO:GO:0006415 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0040007 |
| GO:GO:0040008 | InterPro:IPR024049 | InterPro:IPR029064 | InterPro:L30e-like | RefSeq:NP_172752.1 | ProteinID:OAP12928.1 |
| PFAM:PF03463 | PFAM:PF03464 | PFAM:PF03465 | PO:PO:0000293 | PO:PO:0009025 | PANTHER:PTHR10113 |
| PANTHER:PTHR10113:SF19 | InterPro:Peptide_chain-rel_eRF1/aRF1 | UniProt:Q9LPV8 | InterPro:Release_factor_eRF1/aRF1_N | SMART:SM01194 | SUPFAM:SSF53137 |
| SUPFAM:SSF55315 | SUPFAM:SSF55481 | TIGRFAMs:TIGR03676 | EMBL:U40218 | UniParc:UPI0000001418 | EMBL:X69374 |
| EMBL:Z18188 | InterPro:eRF1_1_Pelota | InterPro:eRF1_2 | InterPro:eRF1_3 | : | : |
Description
ERF1-2Eukaryotic peptide chain release factor subunit 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPV8]
Coordinates
chr1:-:4396348..4398193
Molecular Weight (calculated)
48944.0 Da
IEP (calculated)
5.004
GRAVY (calculated)
-0.458
Length
434 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEADTNIE IWKIKKLIKG LESARGNGTS MISLIMPPRD QVSRVTKMLG DEYGTASNIK SRVNRQSVLS AITSAQQRLK LYNKVPTNGL VLYTGTIVND
101: DGKEKKVTFD FEPFRPINAS LYLCDNKFHT EALNELLESD DKFGFIVMDG NGTLFGTLSG NTREVLHKFT VDLPKKHGRG GQSALRFARL RMEKRHNYVR
201: KTAELATQFY INPATSQPNV SGLILAGSAD FKTELSQSEL FDPRLQAKIL NVVDVSYGGE NGFNQAIELS AEILSNVKFI QEKKLIGKYF EEISQDTGKY
301: VFGVEDTLKA LEMGAIETLI VWENLDINRY ELKNSTTGEM VVKHFGKDQE SDTSNFHDSE TNAELEVQEK MPLLEWFANE YKRFGCTLEF VTNKSQEGSQ
401: FCRGFGGIGG MLRYQLDMRT FDELSDTEVY EDSD
101: DGKEKKVTFD FEPFRPINAS LYLCDNKFHT EALNELLESD DKFGFIVMDG NGTLFGTLSG NTREVLHKFT VDLPKKHGRG GQSALRFARL RMEKRHNYVR
201: KTAELATQFY INPATSQPNV SGLILAGSAD FKTELSQSEL FDPRLQAKIL NVVDVSYGGE NGFNQAIELS AEILSNVKFI QEKKLIGKYF EEISQDTGKY
301: VFGVEDTLKA LEMGAIETLI VWENLDINRY ELKNSTTGEM VVKHFGKDQE SDTSNFHDSE TNAELEVQEK MPLLEWFANE YKRFGCTLEF VTNKSQEGSQ
401: FCRGFGGIGG MLRYQLDMRT FDELSDTEVY EDSD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.