CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034244.1-P	Field mustard	cytosol	100.0	100.0
CDY00188	Canola	cytosol	99.08	99.08
AT3G26618.1	Thale cress	cytosol	97.7	97.7
CDY21074	Canola	cytosol	94.25	94.25
CDY34600	Canola	cytosol	35.63	92.81
Zm00001d013481_P001	Maize	cytosol, extracellular	91.03	90.62
Os03t0702800-01	Rice	cytosol, plasma membrane	90.8	90.39
EER93602	Sorghum	cytosol	90.57	90.16
TraesCS2A01G192900.1	Wheat	cytosol	90.57	90.16
EER99630	Sorghum	cytosol	90.34	89.93
TraesCS2B01G213800.1	Wheat	cytosol	90.34	89.93
Zm00001d006725_P001	Maize	cytosol, extracellular	90.11	89.7
Os07t0587400-01	Rice	cytosol	90.11	89.7
TraesCS4D01G038300.1	Wheat	cytosol	88.74	88.33
TraesCS4B01G040900.1	Wheat	cytosol	88.74	88.33
TraesCS4A01G273100.1	Wheat	cytosol	88.74	88.33
HORVU4Hr1G006500.2	Barley	cytosol	88.97	87.56
CDX86338	Canola	cytosol	85.52	85.71
CDX85313	Canola	cytosol	85.06	85.25
CDY19410	Canola	cytosol	30.8	83.75
HORVU2Hr1G035400.1	Barley	cytosol	89.66	82.28
CDY35766	Canola	cytosol	71.72	74.64
CDY14497	Canola	cytosol	23.91	59.77
CDX98026	Canola	cytosol	18.62	57.86
CDY45916	Canola	cytosol	25.29	42.31

Protein Annotations

MapMan:17.3.2.1.1	Gene3D:3.30.1330.30	Gene3D:3.30.420.60	Gene3D:3.30.960.10	GO:A0A078J0E1	UniProt:A0A078J0E1
EnsemblPlants:CDY56364	ProteinID:CDY56364	ProteinID:CDY56364.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003747	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006412	GO:GO:0006415	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00019474001	InterPro:IPR024049	InterPro:IPR029064
InterPro:L30e-like	PFAM:PF03463	PFAM:PF03464	PFAM:PF03465	PANTHER:PTHR10113	PANTHER:PTHR10113:SF19
InterPro:Peptide_chain-rel_eRF1/aRF1	InterPro:Release_factor_eRF1/aRF1_N	SMART:SM01194	SUPFAM:SSF53137	SUPFAM:SSF55315	SUPFAM:SSF55481
TIGRFAMs:TIGR03676	UniParc:UPI0002543819	InterPro:eRF1_1_Pelota	InterPro:eRF1_2	InterPro:eRF1_3	:

Description

BnaAnng14180DBnaAnng14180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0E1]

Coordinates

chrLK033482:-:3401..4894

Molecular Weight (calculated)

48826.0 Da

IEP (calculated)

5.079

GRAVY (calculated)

-0.428

Length

435 amino acids

Sequence
(BLAST)

001: MAEQESDKNI EIWKIKKLIK GLESARGNGT SMISLIMPPR DQVARVTKML ADEYGTASNI KSRVNRQSVL SAITSAQQRL KLYNKVPPNG LVLYTGTIVT
101: DDGKEKKVTI DFEPFKPINA SLYLCDNKFH TEPLNELLES DDKFGFIVMD GNGTLFGTLS GNTREVLHKF TVDLPKKHGR GGQSALRFAR LRMEKRHNYV
201: RKTAELATQF YINPATSQPN VSGLILAGSA DFKTELSQSE LFDPRLQAKI LNVVDVSYGG ENGFNQAIEL SAEILSNVKF IQEKKLIGKY FEEISQDTGK
301: YVFGVDDTLK ALDMGAVETL IVWENLDINR YELKNGATGE IVIKHLGKDQ ENDQSNFHDA ESSAELEVVE KMPLLEWFAN EYKRFGCTLE FVTNKSQEGS
401: QFCRGFGGIG GLLRYQLDMR TFDELSDGEV YEDSD

Best Arabidopsis Sequence Match ( AT3G26618.1 )
(BLAST)

001: MADQESDKNI EIWKIKKLIK GLETARGNGT SMISLIMPPR DQVARVTKML ADEYGTASNI KSRVNRQSVL SAITSAQQRL KLYNKVPPNG LVLYTGTIVT
101: DDGKEKKVTI DFEPFKPINA SLYLCDNKFH TEPLNELLES DDKFGFIVMD GNGTLFGTLS GNTREVLHKF TVDLPKKHGR GGQSALRFAR LRMEKRHNYV
201: RKTAELATQF YINPATSQPN VSGLILAGSA DFKTELSQSE LFDPRLQAKI LNVVDVSYGG ENGFNQAIEL SAEILSNVKF IQEKKLIGKY FEEISQDTGK
301: YVFGVEDTLK ALEMGAVETL IVWENLDINR YELKNNTTGE IVIKHLGKDQ ENNQSNFHDA ETNAELEVQE KMPLLEWFAN EYKRFGCTLE FVTNKSQEGS
401: QFCRGFGGIG GLLRYQLDMR TFDELSDGEV YEDSD

Arabidopsis Description

ERF1-3ERF1-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VIS2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.