CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98026	Canola	cytosol	32.5	37.14
CDY21074	Canola	cytosol	85.0	31.26
CDY00188	Canola	cytosol	83.75	30.8
CDY56364	Canola	cytosol	83.75	30.8
EER99630	Sorghum	cytosol	83.12	30.43
Zm00001d013481_P001	Maize	cytosol, extracellular	82.5	30.21
Zm00001d006725_P001	Maize	cytosol, extracellular	82.5	30.21
EER93602	Sorghum	cytosol	82.5	30.21
Os03t0702800-01	Rice	cytosol, plasma membrane	81.88	29.98
Os07t0587400-01	Rice	cytosol	81.88	29.98
TraesCS2A01G192900.1	Wheat	cytosol	81.88	29.98
TraesCS2B01G213800.1	Wheat	cytosol	81.88	29.98
CDX86338	Canola	cytosol	81.25	29.95
CDX85313	Canola	cytosol	81.25	29.95
TraesCS4A01G273100.1	Wheat	cytosol	81.25	29.75
TraesCS4B01G040900.1	Wheat	cytosol	81.25	29.75
TraesCS4D01G038300.1	Wheat	cytosol	81.25	29.75
HORVU4Hr1G006500.2	Barley	cytosol	80.62	29.19
HORVU2Hr1G035400.1	Barley	cytosol	81.88	27.64
CDY35766	Canola	cytosol	64.38	24.64
CDY34600	Canola	cytosol	25.62	24.55
CDY14497	Canola	cytosol	23.75	21.84
CDY45916	Canola	cytosol	13.75	8.46

Protein Annotations

Gene3D:3.30.1330.30	Gene3D:3.30.420.60	MapMan:35.1	GO:A0A078FYE6	UniProt:A0A078FYE6	EnsemblPlants:CDY19410
ProteinID:CDY19410	ProteinID:CDY19410.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003747
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006412
GO:GO:0006415	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016043	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00008959001	InterPro:IPR029064	InterPro:L30e-like	PFAM:PF03464
PFAM:PF03465	PANTHER:PTHR10113	PANTHER:PTHR10113:SF19	InterPro:Peptide_chain-rel_eRF1/aRF1	SUPFAM:SSF53137	SUPFAM:SSF55315
UniParc:UPI0004EF4796	InterPro:eRF1_2	InterPro:eRF1_3	:	:	:

Description

BnaC05g09190DBnaC05g09190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FYE6]

Coordinates

chrLK032095:+:658453..659756

Molecular Weight (calculated)

17767.3 Da

IEP (calculated)

9.819

GRAVY (calculated)

-0.300

Length

160 amino acids

Sequence
(BLAST)

001: MDGNVTLFGS LKRFFTSLPV DLPKKHGRGG QSALRFARLR KEKRHNYVRK TAEVATTQFY INPATSQPNV AGLILGGSAG FKTELSQSEM FDPPLQAKIL
101: NIVDVSYGGE NGFNKAIELF AEILSNVKFI QEKKLIGKYF EEISQETGKY VFGVEDTSVP

Best Arabidopsis Sequence Match ( AT1G12920.1 )
(BLAST)

001: MAEEADTNIE IWKIKKLIKG LESARGNGTS MISLIMPPRD QVSRVTKMLG DEYGTASNIK SRVNRQSVLS AITSAQQRLK LYNKVPTNGL VLYTGTIVND
101: DGKEKKVTFD FEPFRPINAS LYLCDNKFHT EALNELLESD DKFGFIVMDG NGTLFGTLSG NTREVLHKFT VDLPKKHGRG GQSALRFARL RMEKRHNYVR
201: KTAELATQFY INPATSQPNV SGLILAGSAD FKTELSQSEL FDPRLQAKIL NVVDVSYGGE NGFNQAIELS AEILSNVKFI QEKKLIGKYF EEISQDTGKY
301: VFGVEDTLKA LEMGAIETLI VWENLDINRY ELKNSTTGEM VVKHFGKDQE SDTSNFHDSE TNAELEVQEK MPLLEWFANE YKRFGCTLEF VTNKSQEGSQ
401: FCRGFGGIGG MLRYQLDMRT FDELSDTEVY EDSD

Arabidopsis Description

ERF1-2Eukaryotic peptide chain release factor subunit 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPV8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.