Factsheet for HORVU3Hr1G104360.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G051800.1	Wheat	cytosol	99.54	96.23
TraesCS3A01G477500.1	Wheat	cytosol	99.08	95.79
TraesCS3D01G472200.1	Wheat	cytosol	99.08	95.79
Os01t0939500-00	Rice	cytosol	93.35	93.35
GSMUA_Achr6P10000_001	Banana	cytosol	59.4	91.2
GSMUA_Achr10P...	Banana	cytosol	58.03	90.68
HORVU4Hr1G006500.2	Barley	cytosol	85.55	84.39
HORVU1Hr1G057880.1	Barley	cytosol	83.03	82.09
HORVU3Hr1G104200.2	Barley	cytosol	80.96	80.41
HORVU2Hr1G035400.1	Barley	cytosol	85.32	78.48
HORVU3Hr1G060530.4	Barley	cytosol	33.49	60.08
GSMUA_Achr10P...	Banana	cytosol	13.07	57.0
HORVU3Hr1G046830.1	Barley	mitochondrion	9.63	51.85
Bra020726.1-P	Field mustard	cytosol	26.15	43.85
CDY45916	Canola	cytosol	26.15	43.85

Protein Annotations

MapMan:17.3.2.1.1	Gene3D:3.30.1330.30	Gene3D:3.30.420.60	Gene3D:3.30.960.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003747	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006412	GO:GO:0006415	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	EnsemblPlantsGene:HORVU3Hr1G104360	EnsemblPlants:HORVU3Hr1G104360.1
InterPro:IPR024049	InterPro:IPR029064	InterPro:L30e-like	UniProt:M0UNX1	PFAM:PF03463	PFAM:PF03464
PFAM:PF03465	PANTHER:PTHR10113	PANTHER:PTHR10113:SF19	InterPro:Peptide_chain-rel_eRF1/aRF1	InterPro:Release_factor_eRF1/aRF1_N	SMART:SM01194
SUPFAM:SSF53137	SUPFAM:SSF55315	SUPFAM:SSF55481	TIGRFAMs:TIGR03676	UniParc:UPI0002948FC5	InterPro:eRF1_1_Pelota
InterPro:eRF1_2	InterPro:eRF1_3	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:666352278..666355704

Molecular Weight (calculated)

48821.7 Da

IEP (calculated)

5.068

GRAVY (calculated)

-0.410

Length

436 amino acids

Sequence
(BLAST)

001: MADGHDNDKN IEIWKVKKLI KGLDAARGNG TSMISLIMPP RDQVSRVTKM LGDEYGTASN IKSRVNRQSV LAAITSAQQR LKLYNRVPPN GLVLYTGTIV
101: TDEGKEKKVT FDFEPFRPIN ASLYLCDNKF HTEALNELLE SDDKFGFIVM DGNGTLFGTL SGNTREVLHK FSVDLPKKHG RGGQSALRFA RLRMEKRHNY
201: VRKTAELATQ FFINPATSQP NVSGLILAGS ADFKTELSQS DMFDQRLATK ILKVVDVSYG GENGFNQAIE ISAEVLSNVK FIQEKKLIGK YFEEISQDTG
301: KYVFGVDDTM AALEMGAVET LIVWENLDIN RYILKNSATG ETAVKHFNKA QEADQSNFKD KATAADLEVV ENTSLLEWFA ENYRQFGCTL EFITNKSQEG
401: SQFCRGFGGI GGILRYQVEV NAYEDVSDEE YDEDFE

Best Arabidopsis Sequence Match ( AT5G47880.1 )
(BLAST)

001: MGDKNDDDKN IEIWKIKKLI KSLEAARGNG TSMISLIMPP RDQVSRVTKM LGDEYGTASN IKSRVNRQSV LGAITSAQQR LKLYNRVPPN GLVLYTGTIV
101: NEDGKEKKVT IDFEPFRPIN ASLYLCDNKF HTEALNELLE SDDKFGFIVM DGNGTLFGTL SGNTREVLHK FSVDLPKKHG RGGQSALRFA RLRMEKRHNY
201: VRKTAELATQ YYINPATSQP NVSGLILAGS ADFKTELSQS DMFDPRLAAK ILNVVDVSYG GENGFNQAIE LSAEILANVK FIQEKRLIGK YFEEISQDTG
301: KYVFGVEDTL NALESGAIET LIVWENLDIN RYVMKNSATG ETVIKHLNKE QEANTENFKV ADSDLALDVE EKLSLLEWLA NEYRRFGCAL EFVTNKSQEG
401: SQFCRGFGGI GGILRYQLDM TAFDSEDGEA LDDDSE

Arabidopsis Description

ERF1-1ERF1-1 [Source:UniProtKB/TrEMBL;Acc:A0A178UFY7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.