Factsheet for GSMUA_Achr10P19540_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P09990_001	Banana	cytosol	74.0	88.1
GSMUA_Achr10P...	Banana	cytosol	70.0	78.65
GSMUA_Achr8P09860_001	Banana	cytosol	66.0	21.36
HORVU3Hr1G104360.1	Barley	cytosol	57.0	13.07
Os01t0939500-00	Rice	cytosol	56.0	12.84
TraesCSU01G051800.1	Wheat	cytosol	57.0	12.64
TraesCS3D01G472200.1	Wheat	cytosol	57.0	12.64
TraesCS3A01G477500.1	Wheat	cytosol	57.0	12.64
Zm00001d037868_P001	Maize	cytosol	54.0	12.33
Os05t0373900-01	Rice	cytosol, plasma membrane	53.0	12.05
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	66.0	12.02
OQU77890	Sorghum	cytosol	53.0	11.62
TraesCS1B01G248600.1	Wheat	cytosol	50.0	11.36
TraesCS1D01G237100.1	Wheat	cytosol	50.0	11.34
TraesCS1A01G235000.1	Wheat	cytosol	50.0	11.29
HORVU1Hr1G057880.1	Barley	cytosol	49.0	11.11
HORVU3Hr1G104200.2	Barley	cytosol	48.0	10.93
TraesCS3D01G472100.1	Wheat	cytosol	48.0	10.91
TraesCS3A01G477400.1	Wheat	cytosol	48.0	10.86
TraesCSU01G150500.1	Wheat	cytosol	48.0	10.86
Bra020726.1-P	Field mustard	cytosol	8.0	3.08
CDY45916	Canola	cytosol	8.0	3.08
GSMUA_Achr6P10000_001	Banana	cytosol	2.0	0.7
GSMUA_Achr10P...	Banana	cytosol	2.0	0.7
GSMUA_Achr10P...	Banana	cytosol	1.0	0.36

Protein Annotations

Gene3D:3.30.1330.30	MapMan:35.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003747
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006412
GO:GO:0006415	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016043	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr10G19540_001	EnsemblPlants:GSMUA_Achr10P19540_001	EnsemblPlants:GSMUA_Achr10T19540_001	InterPro:IPR029064
InterPro:L30e-like	UniProt:M0RJM9	PFAM:PF03465	PANTHER:PTHR10113	PANTHER:PTHR10113:SF14	InterPro:Peptide_chain-rel_eRF1/aRF1
SUPFAM:SSF55315	UniParc:UPI000295F755	InterPro:eRF1_3	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G19540_001]

Coordinates

chr10:+:25870455..25872780

Molecular Weight (calculated)

11712.0 Da

IEP (calculated)

5.920

GRAVY (calculated)

-0.363

Length

100 amino acids

Sequence
(BLAST)

1: MGAVETLIVW ENLDINRYEK ISLLEWFATE YKRFGCTLEF VTNKSQEGSQ FCRGFGGIGG ILRYQLDMRS LDEFSDNEKK KKKAFLDFVI EFGRISEHIK

Best Arabidopsis Sequence Match ( AT3G26618.1 )
(BLAST)

001: MADQESDKNI EIWKIKKLIK GLETARGNGT SMISLIMPPR DQVARVTKML ADEYGTASNI KSRVNRQSVL SAITSAQQRL KLYNKVPPNG LVLYTGTIVT
101: DDGKEKKVTI DFEPFKPINA SLYLCDNKFH TEPLNELLES DDKFGFIVMD GNGTLFGTLS GNTREVLHKF TVDLPKKHGR GGQSALRFAR LRMEKRHNYV
201: RKTAELATQF YINPATSQPN VSGLILAGSA DFKTELSQSE LFDPRLQAKI LNVVDVSYGG ENGFNQAIEL SAEILSNVKF IQEKKLIGKY FEEISQDTGK
301: YVFGVEDTLK ALEMGAVETL IVWENLDINR YELKNNTTGE IVIKHLGKDQ ENNQSNFHDA ETNAELEVQE KMPLLEWFAN EYKRFGCTLE FVTNKSQEGS
401: QFCRGFGGIG GLLRYQLDMR TFDELSDGEV YEDSD

Arabidopsis Description

ERF1-3ERF1-3 [Source:UniProtKB/TrEMBL;Acc:A0A178VIS2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.