CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037868_P001	Maize	cytosol	92.98	96.8
Os05t0373900-01	Rice	cytosol, plasma membrane	85.53	88.64
TraesCS1B01G248600.1	Wheat	cytosol	82.46	85.45
HORVU1Hr1G057880.1	Barley	cytosol	82.46	85.26
TraesCS1D01G237100.1	Wheat	cytosol	82.46	85.26
TraesCS1A01G235000.1	Wheat	cytosol	80.92	83.3
GSMUA_Achr6P10000_001	Banana	cytosol	51.75	83.1
GSMUA_Achr10P...	Banana	cytosol	50.22	82.08
EER93602	Sorghum	cytosol	76.97	80.32
EER99630	Sorghum	cytosol	75.44	78.72
GSMUA_Achr10P...	Banana	cytosol	11.62	53.0
Bra020726.1-P	Field mustard	cytosol	23.25	40.77
CDY45916	Canola	cytosol	23.25	40.77

Protein Annotations

MapMan:17.3.2.1.1	Gene3D:3.30.1330.30	Gene3D:3.30.420.60	Gene3D:3.30.960.10	EntrezGene:8055826	UniProt:A0A1Z5R2C2
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003747	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006412	GO:GO:0006415	GO:GO:0008135
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538
InterPro:IPR024049	InterPro:IPR029064	InterPro:L30e-like	EnsemblPlants:OQU77890	ProteinID:OQU77890	ProteinID:OQU77890.1
PFAM:PF03463	PFAM:PF03464	PFAM:PF03465	PANTHER:PTHR10113	PANTHER:PTHR10113:SF11	InterPro:Peptide_chain-rel_eRF1/aRF1
InterPro:Release_factor_eRF1/aRF1_N	SMART:SM01194	EnsemblPlantsGene:SORBI_3009G118600	SUPFAM:SSF53137	SUPFAM:SSF55315	SUPFAM:SSF55481
unigene:Sbi.5480	TIGRFAMs:TIGR03676	UniParc:UPI000B8BA47D	InterPro:eRF1_1_Pelota	InterPro:eRF1_2	InterPro:eRF1_3

Description

hypothetical protein

Coordinates

chr9:+:46372487..46375938

Molecular Weight (calculated)

50990.5 Da

IEP (calculated)

4.989

GRAVY (calculated)

-0.355

Length

456 amino acids

Sequence
(BLAST)

001: MQSALLFSGE GWSFKHLKMG EVHEADKNIE IWRVKKLIKA LDAARGNGTS MISLIMPPRD QISRVTKMLG DEYGTASNIK SRVNRQSVLA AITSAQQRLK
101: LYSRVPPNGL VLYTGTIVTD DGKEKKVTFD FEPFRPINAS LYLCDNKFHT EALNELLASD DKFGFIIMDG NGTLYGTLSG NSREVLYKFS VDLPKKHGRG
201: GQSAVRFARL RMERRHNYLR KVAELATQYF INPATNQPNI VGLILAGSAD FKNELGKSEM FDPRLQAKVV KMIDVSYGGD SGFNQAIEMS AEVLSDVKFV
301: QEKKLIGKYF EEISQDTGKY VLGVEDTMTA LEMGAVEILI VWENLDVRRY ELKNSVTGET VVKYLNPTQE ADQSNFTDAA TSGDLEVIDN TQLLEWFAEN
401: YHQFGCSLEF VTNKSQEGSQ FCRGFGGIGG ILRYPADVSA YQDGDLSDGE YDEDFE

Best Arabidopsis Sequence Match ( AT1G12920.1 )
(BLAST)

001: MAEEADTNIE IWKIKKLIKG LESARGNGTS MISLIMPPRD QVSRVTKMLG DEYGTASNIK SRVNRQSVLS AITSAQQRLK LYNKVPTNGL VLYTGTIVND
101: DGKEKKVTFD FEPFRPINAS LYLCDNKFHT EALNELLESD DKFGFIVMDG NGTLFGTLSG NTREVLHKFT VDLPKKHGRG GQSALRFARL RMEKRHNYVR
201: KTAELATQFY INPATSQPNV SGLILAGSAD FKTELSQSEL FDPRLQAKIL NVVDVSYGGE NGFNQAIELS AEILSNVKFI QEKKLIGKYF EEISQDTGKY
301: VFGVEDTLKA LEMGAIETLI VWENLDINRY ELKNSTTGEM VVKHFGKDQE SDTSNFHDSE TNAELEVQEK MPLLEWFANE YKRFGCTLEF VTNKSQEGSQ
401: FCRGFGGIGG MLRYQLDMRT FDELSDTEVY EDSD

Arabidopsis Description

ERF1-2Eukaryotic peptide chain release factor subunit 1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPV8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.