Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G300700.1 | Wheat | plastid | 93.21 | 90.89 |
| Os08t0369800-01 | Rice | plastid | 37.52 | 57.85 |
| TraesCS5A01G001500.2 | Wheat | cytosol | 27.16 | 29.2 |
| TraesCS5A01G002200.1 | Wheat | cytosol | 25.3 | 28.17 |
| TraesCS5A01G002400.1 | Wheat | cytosol | 26.66 | 27.89 |
| TraesCS5A01G374000.1 | Wheat | plastid | 25.47 | 25.38 |
| TraesCS2A01G012300.1 | Wheat | mitochondrion, plastid | 23.26 | 24.16 |
| TraesCS2A01G250600.1 | Wheat | plastid | 24.28 | 24.11 |
| TraesCS6A01G271600.1 | Wheat | plastid | 25.64 | 23.63 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G004300.1 | EnsemblPlantsGene:TraesCS4A01G004300 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016702 | GO:GO:0055114 | InterPro:Carotenoid_Oase | PANTHER:PTHR10543 | PANTHER:PTHR10543:SF83 | PFAM:PF03055 |
| MapMan:50.1.12 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:2985236..2995140
Molecular Weight (calculated)
65353.0 Da
IEP (calculated)
7.811
GRAVY (calculated)
-0.244
Length
589 amino acids
Sequence
(BLAST)
(BLAST)
001: MRTSIHGCSL RQPSMRAGRR QPSSVSASAT RLPRQIISAA KELHQQLALR IGDASSNALN YASQRLLDAF VGIVFTLSRQ PLRPTEGNFA PVEEIGDMRE
101: IFDIAGEIPA DFPEGVYIRN GSNPLFGALH SSSSIFGKSH DIWVEGEGML HAVYFTKSNN NTWSIKYTNR YVQSDTFRVE KGLKKPCFLP ATDGDPLAML
201: IAGTLNTLRF GKAFKNMSNT SVFEHAGRVF SAAENDNPHE IDLYSLGTLG SWNVDGGWKM PFTAHPKVIP GTGELVIFGF NVDAPFLTVG VVSADGKKLQ
301: QKVALELDRC TYCHEIGVTT MYNIILDAPL TINKERMLKG APLIEFEKDS YARIGVMPRY GDANSITWFY VQSFCTIHLV NCFEEDDEVV VRGFHVPGSI
401: ILGPRINSNQ GLTEECFSRL YEWRLNLKTR TAIGKYLTGK EVALEFPVIN DKYVGLPHKY AYAQVADSPA NLAGGPGIVR PKFGGFSKIC LDEKEDATTK
501: NKGREDLIKV KYHHLDRNQF CSGATFVPKV NGTNEDDGWI VSFVHDEGTN KSKVHIINAQ TFEYEPIAKI TLPQRVPYGF HGAFISKST
101: IFDIAGEIPA DFPEGVYIRN GSNPLFGALH SSSSIFGKSH DIWVEGEGML HAVYFTKSNN NTWSIKYTNR YVQSDTFRVE KGLKKPCFLP ATDGDPLAML
201: IAGTLNTLRF GKAFKNMSNT SVFEHAGRVF SAAENDNPHE IDLYSLGTLG SWNVDGGWKM PFTAHPKVIP GTGELVIFGF NVDAPFLTVG VVSADGKKLQ
301: QKVALELDRC TYCHEIGVTT MYNIILDAPL TINKERMLKG APLIEFEKDS YARIGVMPRY GDANSITWFY VQSFCTIHLV NCFEEDDEVV VRGFHVPGSI
401: ILGPRINSNQ GLTEECFSRL YEWRLNLKTR TAIGKYLTGK EVALEFPVIN DKYVGLPHKY AYAQVADSPA NLAGGPGIVR PKFGGFSKIC LDEKEDATTK
501: NKGREDLIKV KYHHLDRNQF CSGATFVPKV NGTNEDDGWI VSFVHDEGTN KSKVHIINAQ TFEYEPIAKI TLPQRVPYGF HGAFISKST
001: MACSYILTPN PTKLNLSFAP SDLDAPSPSS SVSFTNTKPR RRKLSANSVS DTPNLLNFPN YPSPNPIIPE KDTSRWNPLQ RAASAALDFA ETALLRRERS
101: KPLPKTVDPR HQISGNYAPV PEQSVKSSLS VDGKIPDCID GVYLRNGANP LFEPVSGHHL FDGDGMVHAV KITNGDASYS CRFTETERLV QEKQLGSPIF
201: PKAIGELHGH SGIARLMLFY ARGLFGLLNH KNGTGVANAG LVYFHDRLLA MSEDDLPYQV RVTDNGDLET IGRFDFDGQL SSAMIAHPKI DPVTKELFAL
301: SYDVVKKPYL KYFKFSPEGE KSPDVEIPLA SPTMMHDFAI TENFVVIPDQ QVVFKLSDMF LGKSPVKYDG EKISRFGILP RNAKDASEMV WVESPETFCF
401: HLWNAWESPE TDEVVVIGSC MTPADSIFNE CDEQLNSVLS EIRLNLKTGK STRRTIIPGS VQMNLEAGMV NRNLLGRKTR YAYLAIAEPW PKVSGFAKVD
501: LSTGEVKNHF YGGKKYGGEP FFLPRGLESD GEDDGYIMSF VHDEESWESE LHIVNAVTLE LEATVKLPSR VPYGFHGTFV NSADMLNQA
101: KPLPKTVDPR HQISGNYAPV PEQSVKSSLS VDGKIPDCID GVYLRNGANP LFEPVSGHHL FDGDGMVHAV KITNGDASYS CRFTETERLV QEKQLGSPIF
201: PKAIGELHGH SGIARLMLFY ARGLFGLLNH KNGTGVANAG LVYFHDRLLA MSEDDLPYQV RVTDNGDLET IGRFDFDGQL SSAMIAHPKI DPVTKELFAL
301: SYDVVKKPYL KYFKFSPEGE KSPDVEIPLA SPTMMHDFAI TENFVVIPDQ QVVFKLSDMF LGKSPVKYDG EKISRFGILP RNAKDASEMV WVESPETFCF
401: HLWNAWESPE TDEVVVIGSC MTPADSIFNE CDEQLNSVLS EIRLNLKTGK STRRTIIPGS VQMNLEAGMV NRNLLGRKTR YAYLAIAEPW PKVSGFAKVD
501: LSTGEVKNHF YGGKKYGGEP FFLPRGLESD GEDDGYIMSF VHDEESWESE LHIVNAVTLE LEATVKLPSR VPYGFHGTFV NSADMLNQA
Arabidopsis Description
NCED5Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C6Z1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.