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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU4Hr1G006300.1 Barley cytosol 86.77 82.7
TraesCS5A01G002400.1 Wheat cytosol 87.52 82.24
TraesCS5D01G002900.1 Wheat plastid 94.71 81.6
TraesCS5A01G001500.2 Wheat cytosol 81.66 78.83
Os12t0640600-01 Rice plasma membrane 79.96 78.33
OQU93261 Sorghum cytosol 79.4 77.21
Zm00001d048373_P002 Maize cytosol, plasma membrane 79.58 76.55
Zm00001d034075_P001 Maize cytosol 5.1 75.0
GSMUA_Achr3P29770_001 Banana cytosol, plasma membrane 72.4 70.02
VIT_13s0064g00810.t01 Wine grape cytosol 66.92 69.41
CDX93902 Canola cytosol 67.86 68.38
CDY53711 Canola cytosol 67.67 68.19
CDY34746 Canola cytosol 16.45 67.97
AT3G63520.1 Thale cress cytosol 68.81 67.66
VIT_13s0064g00840.t01 Wine grape extracellular 69.75 67.58
Solyc01g087250.2.1 Tomato cytosol, plastid 69.19 67.16
Solyc01g087260.2.1 Tomato plastid 68.43 66.42
CDY34748 Canola endoplasmic reticulum, extracellular 59.17 64.8
KRH27468 Soybean endoplasmic reticulum, mitochondrion 65.22 63.89
KRH20815 Soybean cytosol, endoplasmic reticulum, extracellular 67.86 62.54
Bra040449.1-P Field mustard cytosol 63.89 61.79
Bra007826.1-P Field mustard plastid 63.52 56.09
CDX76782 Canola mitochondrion 64.46 55.72
CDX76783 Canola plastid 63.33 54.83
Bra007825.1-P Field mustard plastid 56.52 52.0
CDY34747 Canola cytosol 13.04 51.11
TraesCS5A01G374000.1 Wheat plastid 35.54 31.81
TraesCS2A01G250600.1 Wheat plastid 32.7 29.17
TraesCS2A01G012300.1 Wheat mitochondrion, plastid 30.06 28.04
TraesCS6A01G271600.1 Wheat plastid 32.7 27.07
TraesCS4A01G004300.1 Wheat mitochondrion 28.17 25.3
Protein Annotations
EnsemblPlants:TraesCS5A01G002200.1EnsemblPlantsGene:TraesCS5A01G002200GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152
GO:GO:0016702GO:GO:0055114InterPro:Carotenoid_OasePANTHER:PTHR10543PANTHER:PTHR10543:SF37PFAM:PF03055
MapMan:9.1.6.3.1:::::
Description
No Description!
Coordinates
chr5A:-:1947416..1952551
Molecular Weight (calculated)
60060.3 Da
IEP (calculated)
6.901
GRAVY (calculated)
-0.343
Length
529 amino acids
Sequence
(BLAST)
001: MGEVVVPAPR PRKGVASWAL DMLERLVVRL GYDKKAEPNP WLSGNFAPVL HETPPTAGLP VRGHLPECLN GEFLRVGANP KFDPVAGYHW FDGDGMIHAL
101: HIKDGKPTYV SRYVKTSRFK QEEYFGGAKF MKVGDLKGLF GLFMVLTQEL RKKLKVLDAT YGIGPANTSF IYHHGKLMAL SESDKHYVVK ILEDGDLQTL
201: GLLDYDQRLK HPFTAHPKVD PFTDEMFTFG YSHEPPYCTY RVITKDGVML DPVPITIPES VMMRDFAITA NYSIFMDLPM FFRPKEMVKN DEFIYKFDPA
301: KKARFGILQR YEKDEKNIKW FELPNCFIFH NANAWEEGNE VILITCRHNN VDLDQVNGNQ CNKLEDRGNK LYEMRFNMKT GAASQKQLSV SAIDYPRINE
401: SYTGRKQRYI YCMILESTVK VTGILKMTGI IKFDLHAKPE RSKEHLEVGG NVTGIYDLAP GTFCSEAVFV PKEHGVSGEG DDGKSEVNVI EAKTMSADPV
501: AVVELPSRVP YGFHAFFVNE EQLGHQVEW
Best Arabidopsis Sequence Match ( AT1G30100.1 )
(BLAST)
001: MACSYILTPN PTKLNLSFAP SDLDAPSPSS SVSFTNTKPR RRKLSANSVS DTPNLLNFPN YPSPNPIIPE KDTSRWNPLQ RAASAALDFA ETALLRRERS
101: KPLPKTVDPR HQISGNYAPV PEQSVKSSLS VDGKIPDCID GVYLRNGANP LFEPVSGHHL FDGDGMVHAV KITNGDASYS CRFTETERLV QEKQLGSPIF
201: PKAIGELHGH SGIARLMLFY ARGLFGLLNH KNGTGVANAG LVYFHDRLLA MSEDDLPYQV RVTDNGDLET IGRFDFDGQL SSAMIAHPKI DPVTKELFAL
301: SYDVVKKPYL KYFKFSPEGE KSPDVEIPLA SPTMMHDFAI TENFVVIPDQ QVVFKLSDMF LGKSPVKYDG EKISRFGILP RNAKDASEMV WVESPETFCF
401: HLWNAWESPE TDEVVVIGSC MTPADSIFNE CDEQLNSVLS EIRLNLKTGK STRRTIIPGS VQMNLEAGMV NRNLLGRKTR YAYLAIAEPW PKVSGFAKVD
501: LSTGEVKNHF YGGKKYGGEP FFLPRGLESD GEDDGYIMSF VHDEESWESE LHIVNAVTLE LEATVKLPSR VPYGFHGTFV NSADMLNQA
Arabidopsis Description
NCED5Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C6Z1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.