CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034075_P001	Maize	cytosol	6.43	97.22
Zm00001d048373_P002	Maize	cytosol, plasma membrane	96.32	95.27
TraesCS5D01G001900.1	Wheat	cytosol, golgi	90.26	89.44
Os12t0640600-01	Rice	plasma membrane	88.6	89.26
TraesCS5B01G002600.2	Wheat	cytosol, golgi, plastid	89.71	89.05
TraesCS5A01G001500.2	Wheat	cytosol	89.15	88.5
HORVU5Hr1G000320.9	Barley	plastid	89.15	85.54
TraesCS5D01G002800.1	Wheat	cytosol	84.38	83.3
TraesCS5B01G001800.1	Wheat	cytosol	82.54	83.15
HORVU4Hr1G006300.1	Barley	cytosol	82.72	81.08
TraesCS5A01G002400.1	Wheat	cytosol	83.64	80.82
GSMUA_Achr3P29770_001	Banana	cytosol, plasma membrane	80.33	79.89
TraesCS5A01G002200.1	Wheat	cytosol	77.21	79.4
CDX93902	Canola	cytosol	75.37	78.1
VIT_13s0064g00810.t01	Wine grape	cytosol	72.79	77.65
CDY53711	Canola	cytosol	74.82	77.52
AT3G63520.1	Thale cress	cytosol	76.65	77.51
Solyc01g087250.2.1	Tomato	cytosol, plastid	76.29	76.15
VIT_13s0064g00840.t01	Wine grape	extracellular	76.29	76.01
CDY34746	Canola	cytosol	17.46	74.22
CDY34748	Canola	endoplasmic reticulum, extracellular	65.07	73.29
Solyc01g087260.2.1	Tomato	plastid	73.16	73.03
KRH27468	Soybean	endoplasmic reticulum, mitochondrion	72.06	72.59
TraesCS5D01G002900.1	Wheat	plastid	81.25	71.99
KRH20815	Soybean	cytosol, endoplasmic reticulum, extracellular	74.45	70.56
Bra040449.1-P	Field mustard	cytosol	70.59	70.2
Bra007826.1-P	Field mustard	plastid	70.59	64.11
CDX76783	Canola	plastid	69.49	61.87
CDX76782	Canola	mitochondrion	69.49	61.76
Bra007825.1-P	Field mustard	plastid	61.03	57.74
CDY34747	Canola	cytosol	13.79	55.56
OQU88453	Sorghum	plastid	35.48	33.68
EER93751	Sorghum	plastid	35.85	31.91
KXG30924	Sorghum	plastid	35.66	30.46
OQU89281	Sorghum	cytosol	24.82	27.27
OQU89285	Sorghum	plastid	28.49	25.37
KXG19379	Sorghum	mitochondrion, plastid	26.1	23.87

Protein Annotations

MapMan:9.1.6.3.1	UniProt:A0A1Z5SBG6	InterPro:Carotenoid_Oase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774
GO:GO:0005794	GO:GO:0005886	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009506	GO:GO:0009987	GO:GO:0016020	GO:GO:0016118	GO:GO:0016121	GO:GO:0016124
GO:GO:0016702	GO:GO:0045549	GO:GO:0046872	GO:GO:0055114	EnsemblPlants:OQU93261	ProteinID:OQU93261
ProteinID:OQU93261.1	PFAM:PF03055	PANTHER:PTHR10543	PANTHER:PTHR10543:SF37	EnsemblPlantsGene:SORBI_3001G509200	UniParc:UPI000B8BA8AC

Description

hypothetical protein

Coordinates

chr1:+:77716678..77723304

Molecular Weight (calculated)

61441.7 Da

IEP (calculated)

6.335

GRAVY (calculated)

-0.306

Length

544 amino acids

Sequence
(BLAST)

001: MGTEAEHQDS SVQHDGVVVV PAPRPRKGLA SWALDLLESL VVRLGHDKTK PLHWLSGNFA PVVEETPPAP NLTVRGHLPE CLNGEFVRVG PNPKFVPVAG
101: YHWMIHAMRI KDGKATYVSR YVKTARLKQE EYFGGAKFMK IGDLKGFFGL FMVQMQQLRK KFKVLDFTYG FGTANTALIY HHGKLMALSE ADKPYVVKVL
201: EDGDLQTLGL LDYDKRLKHS FTAHPKVDPF TDEMFTFGYS HEPPYCTYRV ITKEGAMLDP VPITIPESVM MHDFAITENY SIFMDLPLLF RPKEMVKNGE
301: FIYKFDPTKK ARFGILPRYA KDEKVIRWFE LPNCFIFHNA NAWEEGDEVV LITCRLENPD LDKVNGHQSD KLENFGNELY EMRFNMKTGA ASQKQLSVSA
401: VDFPRVNESY TGRKQRFVYC TILDSIAKVT GIIKFDLHAE PESGKKELEV GGNIQGIYDL GPGRFGSEAI FVPKQPGVSG EEDDGYLIFF VHDENTGKSE
501: VNVIDAKTMS ADPVAVVELP NRVPYGFHAF FVTEDQLAQQ AEGQ

Best Arabidopsis Sequence Match ( AT3G63520.1 )
(BLAST)

001: MAEKLSDGSS IISVHPRPSK GFSSKLLDLL ERLVVKLMHD ASLPLHYLSG NFAPIRDETP PVKDLPVHGF LPECLNGEFV RVGPNPKFDA VAGYHWFDGD
101: GMIHGVRIKD GKATYVSRYV KTSRLKQEEF FGAAKFMKIG DLKGFFGLLM VNVQQLRTKL KILDNTYGNG TANTALVYHH GKLLALQEAD KPYVIKVLED
201: GDLQTLGIID YDKRLTHSFT AHPKVDPVTG EMFTFGYSHT PPYLTYRVIS KDGIMHDPVP ITISEPIMMH DFAITETYAI FMDLPMHFRP KEMVKEKKMI
301: YSFDPTKKAR FGVLPRYAKD ELMIRWFELP NCFIFHNANA WEEEDEVVLI TCRLENPDLD MVSGKVKEKL ENFGNELYEM RFNMKTGSAS QKKLSASAVD
401: FPRINECYTG KKQRYVYGTI LDSIAKVTGI IKFDLHAEAE TGKRMLEVGG NIKGIYDLGE GRYGSEAIYV PRETAEEDDG YLIFFVHDEN TGKSCVTVID
501: AKTMSAEPVA VVELPHRVPY GFHALFVTEE QLQEQTLI

Arabidopsis Description

CCD1Carotenoid 9,10(9',10')-cleavage dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:O65572]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.