Subcellular Localization
min:
: max
Winner_takes_all: golgi, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G001500.2 | Wheat | cytosol | 98.54 | 98.72 |
| TraesCS5B01G002600.2 | Wheat | cytosol, golgi, plastid | 97.81 | 97.99 |
| HORVU5Hr1G000320.9 | Barley | plastid | 95.81 | 92.77 |
| OQU93261 | Sorghum | cytosol | 89.44 | 90.26 |
| Zm00001d048373_P002 | Maize | cytosol, plasma membrane | 90.35 | 90.18 |
| Os12t0640600-01 | Rice | plasma membrane | 88.52 | 90.0 |
| TraesCS5D01G002800.1 | Wheat | cytosol | 87.8 | 87.48 |
| GSMUA_Achr3P29770_001 | Banana | cytosol, plasma membrane | 82.33 | 82.63 |
| VIT_13s0064g00810.t01 | Wine grape | cytosol | 74.86 | 80.59 |
| Zm00001d034075_P001 | Maize | cytosol | 5.28 | 80.56 |
| CDX93902 | Canola | cytosol | 75.77 | 79.24 |
| VIT_13s0064g00840.t01 | Wine grape | extracellular | 78.51 | 78.94 |
| CDY53711 | Canola | cytosol | 75.23 | 78.67 |
| AT3G63520.1 | Thale cress | cytosol | 77.05 | 78.62 |
| Solyc01g087250.2.1 | Tomato | cytosol, plastid | 77.23 | 77.8 |
| TraesCS5D01G002900.1 | Wheat | plastid | 83.79 | 74.92 |
| Solyc01g087260.2.1 | Tomato | plastid | 74.13 | 74.68 |
| KRH27468 | Soybean | endoplasmic reticulum, mitochondrion | 72.86 | 74.07 |
| CDY34748 | Canola | endoplasmic reticulum, extracellular | 64.3 | 73.08 |
| CDY34746 | Canola | cytosol | 16.94 | 72.66 |
| KRH20815 | Soybean | cytosol, endoplasmic reticulum, extracellular | 75.23 | 71.95 |
| Bra040449.1-P | Field mustard | cytosol | 70.67 | 70.93 |
| Bra007826.1-P | Field mustard | plastid | 70.13 | 64.27 |
| CDX76782 | Canola | mitochondrion | 70.49 | 63.24 |
| CDX76783 | Canola | plastid | 69.76 | 62.68 |
| Bra007825.1-P | Field mustard | plastid | 61.2 | 58.43 |
| CDY34747 | Canola | cytosol | 13.84 | 56.3 |
| TraesCS5D01G383500.1 | Wheat | plastid | 37.89 | 34.96 |
| TraesCS2D01G251600.1 | Wheat | plastid | 35.7 | 33.68 |
| TraesCS2D01G013000.1 | Wheat | cytosol | 35.34 | 32.17 |
| TraesCS5D01G038800.1 | Wheat | plastid | 35.88 | 32.03 |
| TraesCS6D01G251800.1 | Wheat | plastid | 34.79 | 29.89 |
| TraesCS5D01G186900.1 | Wheat | cytosol | 28.42 | 24.11 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G001900.1 | EnsemblPlantsGene:TraesCS5D01G001900 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016702 | GO:GO:0055114 | InterPro:Carotenoid_Oase | PANTHER:PTHR10543 | PANTHER:PTHR10543:SF37 | PFAM:PF03055 |
| MapMan:9.1.6.3.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5D:+:2135990..2141629
Molecular Weight (calculated)
61729.1 Da
IEP (calculated)
6.214
GRAVY (calculated)
-0.292
Length
549 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEAVAAAED ALKKEGAVVV PAPRPSKGVA SWAVDLLERL AVRLGHDKAK PLHWLSGNFA PVRDETPPAA GLPVRGHLPE CLNGEFVRVG PNPKFVPVAG
101: YHWFDGDGMI HAMRIKDGKA TYVSRYVKTS RLKQEEYFGG AKFMKIGDLK GFFGLFMVQM QALRKKLKIL DVTYGFGTAN TALIYHHGKL LALSEADKPY
201: VVKVLEDGDL QTLGLLDYDK RLKHSFTAHP KVDPFTDEMF TFGYSHEPPY CTYRVITKDG VMLDPVPITI PESVMMHDFA ITENYSIFMD LPLLFRPKEM
301: VKNGEFIYKF DPTKKGRFGI LQRYEKDEKT IRWFELPNCF IFHNANAWEE GDEVVLITCR LENPDLDKVN GTQNEKLENF GNELYEMRFN MKTGAASQKQ
401: LSVSAVDFPR VNESYTGRKQ RYVYCTILDS IAKVTGIIKF DLHAEPESGK KQLEVGGNVM GIYDLGPGRF GSEAVFVPKE PGVSGEEDDG YLIFFVHDEN
501: TGKSEVNVID AKTMSPDPVA VVELPNRVPY GFHAFFVNEE QLVHQQAEV
101: YHWFDGDGMI HAMRIKDGKA TYVSRYVKTS RLKQEEYFGG AKFMKIGDLK GFFGLFMVQM QALRKKLKIL DVTYGFGTAN TALIYHHGKL LALSEADKPY
201: VVKVLEDGDL QTLGLLDYDK RLKHSFTAHP KVDPFTDEMF TFGYSHEPPY CTYRVITKDG VMLDPVPITI PESVMMHDFA ITENYSIFMD LPLLFRPKEM
301: VKNGEFIYKF DPTKKGRFGI LQRYEKDEKT IRWFELPNCF IFHNANAWEE GDEVVLITCR LENPDLDKVN GTQNEKLENF GNELYEMRFN MKTGAASQKQ
401: LSVSAVDFPR VNESYTGRKQ RYVYCTILDS IAKVTGIIKF DLHAEPESGK KQLEVGGNVM GIYDLGPGRF GSEAVFVPKE PGVSGEEDDG YLIFFVHDEN
501: TGKSEVNVID AKTMSPDPVA VVELPNRVPY GFHAFFVNEE QLVHQQAEV
001: MAEKLSDGSS IISVHPRPSK GFSSKLLDLL ERLVVKLMHD ASLPLHYLSG NFAPIRDETP PVKDLPVHGF LPECLNGEFV RVGPNPKFDA VAGYHWFDGD
101: GMIHGVRIKD GKATYVSRYV KTSRLKQEEF FGAAKFMKIG DLKGFFGLLM VNVQQLRTKL KILDNTYGNG TANTALVYHH GKLLALQEAD KPYVIKVLED
201: GDLQTLGIID YDKRLTHSFT AHPKVDPVTG EMFTFGYSHT PPYLTYRVIS KDGIMHDPVP ITISEPIMMH DFAITETYAI FMDLPMHFRP KEMVKEKKMI
301: YSFDPTKKAR FGVLPRYAKD ELMIRWFELP NCFIFHNANA WEEEDEVVLI TCRLENPDLD MVSGKVKEKL ENFGNELYEM RFNMKTGSAS QKKLSASAVD
401: FPRINECYTG KKQRYVYGTI LDSIAKVTGI IKFDLHAEAE TGKRMLEVGG NIKGIYDLGE GRYGSEAIYV PRETAEEDDG YLIFFVHDEN TGKSCVTVID
501: AKTMSAEPVA VVELPHRVPY GFHALFVTEE QLQEQTLI
101: GMIHGVRIKD GKATYVSRYV KTSRLKQEEF FGAAKFMKIG DLKGFFGLLM VNVQQLRTKL KILDNTYGNG TANTALVYHH GKLLALQEAD KPYVIKVLED
201: GDLQTLGIID YDKRLTHSFT AHPKVDPVTG EMFTFGYSHT PPYLTYRVIS KDGIMHDPVP ITISEPIMMH DFAITETYAI FMDLPMHFRP KEMVKEKKMI
301: YSFDPTKKAR FGVLPRYAKD ELMIRWFELP NCFIFHNANA WEEEDEVVLI TCRLENPDLD MVSGKVKEKL ENFGNELYEM RFNMKTGSAS QKKLSASAVD
401: FPRINECYTG KKQRYVYGTI LDSIAKVTGI IKFDLHAEAE TGKRMLEVGG NIKGIYDLGE GRYGSEAIYV PRETAEEDDG YLIFFVHDEN TGKSCVTVID
501: AKTMSAEPVA VVELPHRVPY GFHALFVTEE QLQEQTLI
Arabidopsis Description
CCD1Carotenoid 9,10(9',10')-cleavage dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:O65572]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.