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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • cytosol 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G268400.1 Wheat plastid 95.36 93.12
TraesCS2A01G250600.1 Wheat plastid 93.99 92.24
Zm00001d018819_P001 Maize plastid 79.9 81.15
OQU88453 Sorghum plastid 79.21 80.45
Zm00001d007876_P001 Maize plastid 79.04 80.0
Os07t0154100-01 Rice plastid 79.55 79.55
Bra001552.1-P Field mustard cytosol 45.88 67.42
CDX82482 Canola cytosol 45.7 67.17
CDY57471 Canola cytosol 45.53 66.92
PGSC0003DMT400071048 Potato cytosol, mitochondrion 57.9 66.6
CDX98456 Canola cytosol 28.87 65.88
TraesCS5D01G383500.1 Wheat plastid 65.64 64.2
GSMUA_Achr2P12950_001 Banana plastid 63.23 62.48
CDY39117 Canola mitochondrion 59.28 62.39
Bra012603.1-P Field mustard cytosol 47.25 62.22
GSMUA_Achr4P22870_001 Banana plastid 63.75 61.73
GSMUA_Achr7P01250_001 Banana plastid 63.57 61.36
GSMUA_Achr5P02570_001 Banana plastid 63.75 60.82
GSMUA_Achr6P31180_001 Banana plastid 62.89 60.7
TraesCS5D01G038800.1 Wheat plastid 63.92 60.49
VIT_19s0093g00550.t01 Wine grape plastid 62.03 59.28
Zm00001d042076_P001 Maize cytosol, plastid 42.44 58.81
CDY33218 Canola plastid 60.31 58.7
GSMUA_Achr4P31460_001 Banana plastid 60.65 58.54
PGSC0003DMT400039054 Potato plastid 58.25 58.45
Solyc08g016720.1.1 Tomato plastid 58.25 58.35
Bra027336.1-P Field mustard plastid 59.79 58.29
CDX98455 Canola plastid 59.79 58.29
CDX97576 Canola plastid 59.79 58.29
Bra021558.1-P Field mustard plastid 59.79 58.19
Solyc07g056570.1.1 Tomato plastid 60.48 58.18
VIT_10s0003g03750.t01 Wine grape plastid 60.31 58.02
CDY52448 Canola plastid 59.97 57.97
AT3G14440.1 Thale cress plastid 59.62 57.93
Bra035033.1-P Field mustard plastid 59.79 57.81
CDX88443 Canola plastid 59.62 57.64
Bra008358.1-P Field mustard plastid 58.08 57.58
Bra032359.1-P Field mustard plastid 57.73 57.14
CDY26294 Canola plastid 57.73 57.05
AT1G30100.1 Thale cress plastid 57.56 56.88
CDY61838 Canola plastid 57.56 56.88
Zm00001d022623_P001 Maize cytosol 35.57 55.5
Bra013298.1-P Field mustard plastid 55.33 55.42
CDX78842 Canola plastid 54.98 55.08
CDX99475 Canola plastid 54.98 55.08
CDY55629 Canola cytosol, plastid 54.98 54.89
AT4G18350.1 Thale cress cytosol, plastid 54.81 54.72
CDY01534 Canola cytosol, plastid 54.81 54.72
AT1G78390.1 Thale cress cytosol, plastid 60.14 53.27
CDX98457 Canola plastid 28.01 51.75
TraesCS2D01G013000.1 Wheat cytosol 52.06 50.25
KRH45171 Soybean plastid 12.03 42.42
TraesCS5D01G001900.1 Wheat cytosol, golgi 33.68 35.7
TraesCS6D01G251800.1 Wheat plastid 38.49 35.05
TraesCS5D01G002800.1 Wheat cytosol 32.82 34.66
TraesCS5D01G002900.1 Wheat plastid 32.47 30.78
TraesCS5D01G186900.1 Wheat cytosol 24.91 22.41
Protein Annotations
EnsemblPlants:TraesCS2D01G251600.1EnsemblPlantsGene:TraesCS2D01G251600GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152
GO:GO:0016702GO:GO:0055114InterPro:Carotenoid_OasePANTHER:PTHR10543PANTHER:PTHR10543:SF49PFAM:PF03055
MapMan:11.1.1.4:::::
Description
No Description!
Coordinates
chr2D:-:301378105..301379853
Molecular Weight (calculated)
63025.8 Da
IEP (calculated)
6.274
GRAVY (calculated)
-0.244
Length
582 amino acids
Sequence
(BLAST)
001: MASSITAPAA APGSVVRPPA KVAPNDPRKN ADGSAVVTWK GPMRAAPARK KWPNPFQRMV AAALDAVEDR LVAGILERKH PLPRTVDPAV QIAGNYAPVG
101: ELPPAGPEDL PVVSGRVPAC LEGVYVRNGA NPLHAPRAGH HLFDGDGMLH AVRLGGGRAE SYACRFTETA RLRQEREIGR PIFPKAIGEL HGHSGVARLA
201: LFGARSLCGV VDASQGIGVA NAGLVYHDGR LLAMSEDDLP YHVRVTPDGD LETVGRYDFN GQLDGAMIAH PKLDPATGEL FALSYNVVSK PYLKYLYFTA
301: DGHKSHDVDI PVDEPPMIHD FAVTENYAVV PDQQIVFKLQ EMVLGGSPVV YDKNKTARFG VLPKRAANAL ELRWVEVPDC FCFHLWNAWG GEATGEIVVI
401: GSCMTPPDAV FNESPDQEQS FRSVLSEIRL DPRTGTSRRR AVLREADQVN LEAGMVNRQL LGRKTRYAYL AIAEPWPRVS GFAKVDLESG TAEKFTYGEG
501: RYGGEPCFVP HADGSGAEDD GYVLCFVHDE SRGSADGTSS ELLVVNARDL RSEATVELPG RVPYGFHGTF ITATELQRQA QL
Best Arabidopsis Sequence Match ( AT1G30100.1 )
(BLAST)
001: MACSYILTPN PTKLNLSFAP SDLDAPSPSS SVSFTNTKPR RRKLSANSVS DTPNLLNFPN YPSPNPIIPE KDTSRWNPLQ RAASAALDFA ETALLRRERS
101: KPLPKTVDPR HQISGNYAPV PEQSVKSSLS VDGKIPDCID GVYLRNGANP LFEPVSGHHL FDGDGMVHAV KITNGDASYS CRFTETERLV QEKQLGSPIF
201: PKAIGELHGH SGIARLMLFY ARGLFGLLNH KNGTGVANAG LVYFHDRLLA MSEDDLPYQV RVTDNGDLET IGRFDFDGQL SSAMIAHPKI DPVTKELFAL
301: SYDVVKKPYL KYFKFSPEGE KSPDVEIPLA SPTMMHDFAI TENFVVIPDQ QVVFKLSDMF LGKSPVKYDG EKISRFGILP RNAKDASEMV WVESPETFCF
401: HLWNAWESPE TDEVVVIGSC MTPADSIFNE CDEQLNSVLS EIRLNLKTGK STRRTIIPGS VQMNLEAGMV NRNLLGRKTR YAYLAIAEPW PKVSGFAKVD
501: LSTGEVKNHF YGGKKYGGEP FFLPRGLESD GEDDGYIMSF VHDEESWESE LHIVNAVTLE LEATVKLPSR VPYGFHGTFV NSADMLNQA
Arabidopsis Description
NCED5Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C6Z1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.