Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plastid 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82482 | Canola | cytosol | 97.47 | 97.47 |
| Bra001552.1-P | Field mustard | cytosol | 96.97 | 96.97 |
| CDX98456 | Canola | cytosol | 52.78 | 81.96 |
| CDY39117 | Canola | mitochondrion | 92.93 | 66.55 |
| Zm00001d023690_P001 | Maize | cytosol | 21.97 | 66.41 |
| Zm00001d027690_P001 | Maize | cytosol | 12.88 | 66.23 |
| Zm00001d008638_P001 | Maize | cytosol | 13.64 | 65.85 |
| CDX98455 | Canola | plastid | 92.17 | 61.14 |
| CDX97576 | Canola | plastid | 92.17 | 61.14 |
| PGSC0003DMT400071048 | Potato | cytosol, mitochondrion | 77.78 | 60.87 |
| CDY33218 | Canola | plastid | 91.67 | 60.7 |
| Os12t0617400-01 | Rice | cytosol | 42.93 | 60.07 |
| AT3G14440.1 | Thale cress | plastid | 89.39 | 59.1 |
| VIT_19s0093g00550.t01 | Wine grape | plastid | 79.55 | 51.72 |
| Solyc07g056570.1.1 | Tomato | plastid | 78.28 | 51.24 |
| CDY26294 | Canola | plastid | 74.49 | 50.08 |
| CDX88443 | Canola | plastid | 76.01 | 50.0 |
| CDY61838 | Canola | plastid | 73.99 | 49.75 |
| CDY52448 | Canola | plastid | 75.51 | 49.67 |
| CDY01534 | Canola | cytosol, plastid | 71.97 | 48.89 |
| CDY55629 | Canola | cytosol, plastid | 71.97 | 48.89 |
| CDX99475 | Canola | plastid | 71.72 | 48.88 |
| GSMUA_Achr4P22870_001 | Banana | plastid | 73.99 | 48.75 |
| CDX78842 | Canola | plastid | 71.21 | 48.54 |
| Zm00001d031086_P001 | Maize | plastid | 69.19 | 48.15 |
| GSMUA_Achr6P31180_001 | Banana | plastid | 72.98 | 47.93 |
| HORVU5Hr1G008050.1 | Barley | plastid | 72.98 | 47.61 |
| GSMUA_Achr2P12950_001 | Banana | plastid | 70.45 | 47.37 |
| GSMUA_Achr7P01250_001 | Banana | plastid | 71.97 | 47.26 |
| GSMUA_Achr4P31460_001 | Banana | plastid | 71.72 | 47.1 |
| TraesCS5B01G029300.1 | Wheat | plastid | 72.98 | 47.07 |
| TraesCS5D01G383500.1 | Wheat | plastid | 70.71 | 47.06 |
| TraesCS5B01G375900.1 | Wheat | plastid | 70.71 | 47.06 |
| GSMUA_Achr5P02570_001 | Banana | plastid | 72.47 | 47.05 |
| TraesCS5A01G374000.1 | Wheat | plastid | 70.2 | 47.04 |
| OQU88453 | Sorghum | plastid | 67.93 | 46.95 |
| Os03t0645900-00 | Rice | plastid | 71.97 | 46.88 |
| Zm00001d007876_P001 | Maize | plastid | 67.93 | 46.78 |
| TraesCS5D01G038800.1 | Wheat | plastid | 72.47 | 46.67 |
| Zm00001d018819_P001 | Maize | plastid | 67.42 | 46.6 |
| HORVU5Hr1G054970.1 | Barley | cytosol | 70.71 | 46.05 |
| Os07t0154100-01 | Rice | plastid | 67.42 | 45.88 |
| Zm00001d033222_P001 | Maize | extracellular | 69.7 | 45.7 |
| TraesCS2D01G251600.1 | Wheat | plastid | 66.92 | 45.53 |
| EER93751 | Sorghum | plastid | 70.2 | 45.5 |
| Zm00001d013689_P001 | Maize | plastid | 68.94 | 45.42 |
| Zm00001d041319_P001 | Maize | plastid | 68.94 | 45.2 |
| TraesCS2B01G268400.1 | Wheat | plastid | 67.17 | 44.63 |
| TraesCS2A01G250600.1 | Wheat | plastid | 65.66 | 43.84 |
| HORVU5Hr1G044510.1 | Barley | cytosol | 65.91 | 43.5 |
| HORVU5Hr1G092850.2 | Barley | plastid | 70.71 | 43.48 |
| CDX98457 | Canola | plastid | 33.84 | 42.54 |
| KRH43866 | Soybean | plastid | 48.99 | 42.27 |
| KRH13600 | Soybean | plastid | 61.36 | 42.26 |
| Zm00001d042076_P001 | Maize | cytosol, plastid | 43.69 | 41.19 |
| CDX77467 | Canola | plastid | 60.35 | 40.85 |
| CDX85148 | Canola | cytosol | 60.1 | 40.68 |
| Zm00001d022623_P001 | Maize | cytosol | 36.87 | 39.14 |
| Zm00001d023458_P001 | Maize | cytosol | 11.62 | 32.62 |
| Zm00001d000095_P001 | Maize | cytosol | 12.88 | 31.1 |
| CDY34748 | Canola | endoplasmic reticulum, extracellular | 36.87 | 30.23 |
| CDY53711 | Canola | cytosol | 39.39 | 29.71 |
| CDX93902 | Canola | cytosol | 38.89 | 29.33 |
| CDY34747 | Canola | cytosol | 9.6 | 28.15 |
| CDY34746 | Canola | cytosol | 9.09 | 28.12 |
| Zm00001d035724_P001 | Maize | plastid | 44.95 | 28.03 |
| CDX99397 | Canola | plastid | 41.16 | 27.49 |
| CDX76489 | Canola | plastid | 36.62 | 27.26 |
| CDX78923 | Canola | plastid | 40.91 | 27.18 |
| CDX76782 | Canola | mitochondrion | 37.88 | 24.51 |
| CDX76783 | Canola | plastid | 36.11 | 23.4 |
| Zm00001d027592_P001 | Maize | mitochondrion | 19.19 | 17.84 |
| Zm00001d000157_P001 | Maize | cytosol | 3.28 | 12.38 |
| Zm00001d019813_P001 | Maize | plastid | 2.78 | 5.82 |
| Zm00001d009286_P001 | Maize | plastid | 2.78 | 4.37 |
| Zm00001d033377_P001 | Maize | plastid | 2.78 | 3.87 |
Protein Annotations
| EnsemblPlants:CDY57471 | EnsemblPlantsGene:GSBRNA2T00022260001 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016702 | GO:GO:0046872 | GO:GO:0055114 | InterPro:Carotenoid_Oase | PANTHER:PTHR10543 |
| PANTHER:PTHR10543:SF42 | PFAM:PF03055 | ProteinID:CDY57471 | ProteinID:CDY57471.1 | UniParc:UPI0004EE0CE3 | UniProt:A0A078IYV6 |
| MapMan:11.1.1.4 | : | : | : | : | : |
Description
BnaCnng32080DBnaCnng32080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IYV6]
Coordinates
chrLK033579:-:13283..14919
Molecular Weight (calculated)
44300.7 Da
IEP (calculated)
4.861
GRAVY (calculated)
-0.219
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MVHAVKFEDG TASYACRFTQ TNRFIQERRL GRPVFPKAIG ELHGHTGIAR LMLFYARAAA GLVDPAHGTG VANAGLVYFN NRLLAMSEDD LPYQVRITPS
101: GDLKTVGRYD FNGQLESTMI AHPKVDPESG ELFALSYDVV SKPFLKYFRF SPEGIKSPDV EINLDQPTMM HDFAITENFV VIPDQQVVFK LPEMIRGGSP
201: VVYDKEKVAR FGVLDKYAGD SSAIRWIEAQ ECFCFHLWNA WEEPETEEIV VIGSTGESTR RPIISDGEEQ VNLEAGMVNR NMLGRKTRFA YLALAEPWPK
301: VSGFAKVDLF TGEVKKYLYG GDRYGGEPLF LPGDENRAED DGYILCFVHD EETWKSELQI VNAVSLEVEA TVKLPSRVPY GFHGTFIGAN DLATQV
101: GDLKTVGRYD FNGQLESTMI AHPKVDPESG ELFALSYDVV SKPFLKYFRF SPEGIKSPDV EINLDQPTMM HDFAITENFV VIPDQQVVFK LPEMIRGGSP
201: VVYDKEKVAR FGVLDKYAGD SSAIRWIEAQ ECFCFHLWNA WEEPETEEIV VIGSTGESTR RPIISDGEEQ VNLEAGMVNR NMLGRKTRFA YLALAEPWPK
301: VSGFAKVDLF TGEVKKYLYG GDRYGGEPLF LPGDENRAED DGYILCFVHD EETWKSELQI VNAVSLEVEA TVKLPSRVPY GFHGTFIGAN DLATQV
001: MACSYILTPN PTKLNLSFAP SDLDAPSPSS SVSFTNTKPR RRKLSANSVS DTPNLLNFPN YPSPNPIIPE KDTSRWNPLQ RAASAALDFA ETALLRRERS
101: KPLPKTVDPR HQISGNYAPV PEQSVKSSLS VDGKIPDCID GVYLRNGANP LFEPVSGHHL FDGDGMVHAV KITNGDASYS CRFTETERLV QEKQLGSPIF
201: PKAIGELHGH SGIARLMLFY ARGLFGLLNH KNGTGVANAG LVYFHDRLLA MSEDDLPYQV RVTDNGDLET IGRFDFDGQL SSAMIAHPKI DPVTKELFAL
301: SYDVVKKPYL KYFKFSPEGE KSPDVEIPLA SPTMMHDFAI TENFVVIPDQ QVVFKLSDMF LGKSPVKYDG EKISRFGILP RNAKDASEMV WVESPETFCF
401: HLWNAWESPE TDEVVVIGSC MTPADSIFNE CDEQLNSVLS EIRLNLKTGK STRRTIIPGS VQMNLEAGMV NRNLLGRKTR YAYLAIAEPW PKVSGFAKVD
501: LSTGEVKNHF YGGKKYGGEP FFLPRGLESD GEDDGYIMSF VHDEESWESE LHIVNAVTLE LEATVKLPSR VPYGFHGTFV NSADMLNQA
101: KPLPKTVDPR HQISGNYAPV PEQSVKSSLS VDGKIPDCID GVYLRNGANP LFEPVSGHHL FDGDGMVHAV KITNGDASYS CRFTETERLV QEKQLGSPIF
201: PKAIGELHGH SGIARLMLFY ARGLFGLLNH KNGTGVANAG LVYFHDRLLA MSEDDLPYQV RVTDNGDLET IGRFDFDGQL SSAMIAHPKI DPVTKELFAL
301: SYDVVKKPYL KYFKFSPEGE KSPDVEIPLA SPTMMHDFAI TENFVVIPDQ QVVFKLSDMF LGKSPVKYDG EKISRFGILP RNAKDASEMV WVESPETFCF
401: HLWNAWESPE TDEVVVIGSC MTPADSIFNE CDEQLNSVLS EIRLNLKTGK STRRTIIPGS VQMNLEAGMV NRNLLGRKTR YAYLAIAEPW PKVSGFAKVD
501: LSTGEVKNHF YGGKKYGGEP FFLPRGLESD GEDDGYIMSF VHDEESWESE LHIVNAVTLE LEATVKLPSR VPYGFHGTFV NSADMLNQA
Arabidopsis Description
NCED5Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C6Z1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.