CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45171	Soybean	plastid	23.97	66.67
CDX98456	Canola	cytosol	33.55	60.39
PGSC0003DMT400071048	Potato	cytosol, mitochondrion	61.22	55.53
Solyc07g056570.1.1	Tomato	plastid	67.97	51.57
VIT_19s0093g00550.t01	Wine grape	plastid	68.19	51.4
CDY39117	Canola	mitochondrion	61.66	51.18
CDX97576	Canola	plastid	64.05	49.25
CDX98455	Canola	plastid	64.05	49.25
CDY57471	Canola	cytosol	42.27	48.99
CDY33218	Canola	plastid	63.62	48.83
CDX82482	Canola	cytosol	42.05	48.74
Bra021558.1-P	Field mustard	plastid	63.4	48.66
Bra027336.1-P	Field mustard	plastid	63.18	48.58
Bra001552.1-P	Field mustard	cytosol	41.83	48.48
AT3G14440.1	Thale cress	plastid	62.96	48.25
KRH13600	Soybean	plastid	58.61	46.78
CDX98457	Canola	plastid	30.94	45.08
KRH58642	Soybean	plastid	57.3	44.73
KRH42549	Soybean	plastid	55.99	43.63
KRH27468	Soybean	endoplasmic reticulum, mitochondrion	29.19	24.81
KRH20815	Soybean	cytosol, endoplasmic reticulum, extracellular	30.07	24.04
KRH76475	Soybean	plastid	30.72	23.9
KRH52736	Soybean	mitochondrion, plastid	23.75	18.57
KRH62063	Soybean	cytosol	18.3	17.39
KRH62062	Soybean	cytosol, plastid	21.79	17.27
KRH52732	Soybean	plastid	21.35	16.87

Protein Annotations

EMBL:ACUP02004899	EMBL:ACUP02004900	EnsemblPlants:KRH43866	EnsemblPlantsGene:GLYMA_08G176300	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016702	GO:GO:0046872	GO:GO:0055114
InterPro:Carotenoid_Oase	PANTHER:PTHR10543	PANTHER:PTHR10543:SF42	PFAM:PF03055	ProteinID:KRH43866	ProteinID:KRH43866.1
SEG:seg	UniParc:UPI0006ED5A92	UniProt:A0A0R0INQ1	MapMan:50.1.12	:	:

Description

hypothetical protein

Coordinates

chr8:-:14084593..14086341

Molecular Weight (calculated)

50925.6 Da

IEP (calculated)

8.561

GRAVY (calculated)

-0.432

Length

459 amino acids

Sequence
(BLAST)

001: MASSATNTWI KTTLPSLPTS SPTTLNKRFP SYPNSNSNSN TITCSLQTLH FPKKYQPTST TTTTKTTTTT TTTTTSPARE TKPVITSPSE TKHPLPQKWN
101: FLQKAAASAL DMVETALVSH ERQHPLPKTA DPRVQIAGNF APVPEHPAHQ SLPVTGKIPK CIEGVYVRNG ANPLYEPVAG HHFFDGDGMP SVKLHGHSGI
201: ARLLLFYARS LFGLVDGSHG MGVANAGLVY FNNHLLAMSE DDLPYHLRIT PNGDLTTNKV SRFGILDKYV KDANDMKWID ATECFCFHLW NAWEEPENDE
301: IVVIELKSIL SEIRLNLKTG KSTRKPIISE SEQVNLEAGM VNRNKLGRKT KFGYLALAEP WPKVSGFAKV DLFSGEVKKY MYGEERFGGE PLFLPNGVDG
401: DEDDGHILAF VHDEKEWKSE LQIVNAKTLK LEASVKLPSR VPYGFHGTFI HSKDLRKQA

Best Arabidopsis Sequence Match ( AT1G30100.1 )
(BLAST)

001: MACSYILTPN PTKLNLSFAP SDLDAPSPSS SVSFTNTKPR RRKLSANSVS DTPNLLNFPN YPSPNPIIPE KDTSRWNPLQ RAASAALDFA ETALLRRERS
101: KPLPKTVDPR HQISGNYAPV PEQSVKSSLS VDGKIPDCID GVYLRNGANP LFEPVSGHHL FDGDGMVHAV KITNGDASYS CRFTETERLV QEKQLGSPIF
201: PKAIGELHGH SGIARLMLFY ARGLFGLLNH KNGTGVANAG LVYFHDRLLA MSEDDLPYQV RVTDNGDLET IGRFDFDGQL SSAMIAHPKI DPVTKELFAL
301: SYDVVKKPYL KYFKFSPEGE KSPDVEIPLA SPTMMHDFAI TENFVVIPDQ QVVFKLSDMF LGKSPVKYDG EKISRFGILP RNAKDASEMV WVESPETFCF
401: HLWNAWESPE TDEVVVIGSC MTPADSIFNE CDEQLNSVLS EIRLNLKTGK STRRTIIPGS VQMNLEAGMV NRNLLGRKTR YAYLAIAEPW PKVSGFAKVD
501: LSTGEVKNHF YGGKKYGGEP FFLPRGLESD GEDDGYIMSF VHDEESWESE LHIVNAVTLE LEATVKLPSR VPYGFHGTFV NSADMLNQA

Arabidopsis Description

NCED5Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C6Z1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.