CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62062	Soybean	cytosol, plastid	93.8	94.13
KRH52736	Soybean	mitochondrion, plastid	67.47	66.78
KRH62063	Soybean	cytosol	52.84	63.56
VIT_11s0016g02740.t01	Wine grape	cytosol	19.28	59.89
VIT_04s0008g03510.t01	Wine grape	cytosol	55.08	56.44
Solyc08g066720.1.1	Tomato	cytosol	38.9	54.59
PGSC0003DMT400011006	Potato	cytosol	53.53	51.24
PGSC0003DMT400011015	Potato	plastid	53.7	50.9
VIT_04s0008g03480.t01	Wine grape	cytosol	58.18	48.63
Os06t0162550-00	Rice	mitochondrion, plastid	41.65	42.31
KXG19379	Sorghum	mitochondrion, plastid	43.03	42.02
Zm00001d045232_P001	Maize	plastid	42.34	40.13
VIT_04s0008g03450.t01	Wine grape	plastid	27.54	37.04
KRH20815	Soybean	cytosol, endoplasmic reticulum, extracellular	28.4	28.75
KRH27468	Soybean	endoplasmic reticulum, mitochondrion	26.51	28.52
KRH42549	Soybean	plastid	25.65	25.3
KRH58642	Soybean	plastid	25.47	25.17
KRH76475	Soybean	plastid	24.61	24.24
KRH43866	Soybean	plastid	16.87	21.35
KRH45171	Soybean	plastid	5.16	18.18
KRH13600	Soybean	plastid	16.52	16.7

Protein Annotations

EMBL:ACUP02003429	EnsemblPlants:KRH52732	EnsemblPlantsGene:GLYMA_06G085000	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016702	GO:GO:0046872	GO:GO:0055114	InterPro:Carotenoid_Oase
PANTHER:PTHR10543	PANTHER:PTHR10543:SF30	PFAM:PF03055	ProteinID:KRH52732	ProteinID:KRH52732.1	UniParc:UPI000295FEAA
UniProt:K7KTX3	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:6524339..6529016

Molecular Weight (calculated)

65408.1 Da

IEP (calculated)

5.302

GRAVY (calculated)

-0.193

Length

581 amino acids

Sequence
(BLAST)

001: METHMALATS YMTLAPKYCC VQKRSFIVTS GLSSAFKPIL RALPQIPRQI DASKTFTDIK SKFLNAVVDS AFEFVDQLVL PSQNNFAPVE ELGEPVAITY
101: IEGDIPDHFP EGVFIRNGPN PLFGGLKSSK SILGRTNSVW VEGEGMLHAL YFKRESDNGC CTIVYNNRYV ETETYKLEKQ SIKPLFLPAV KGDTFAVLSS
201: MLLNGLRFGQ LNKDYSNTNV FEHSGKFYSV SENHIPQEID IFTLNTLKYW DVNGAWNRPF ASHPKKVPGT GELVIFGVDA TKPYLEIGIV SADGKELVHK
301: EDIKLDRCSL CHDIGITSRY IVILDLPLIV DSNRLLKRGP LIKYEKEEYA RIGIMPLYGD ENSIQWFEVE PNSTFHIINS FEDGHEVVLW GCRALDSIIP
401: GPEDGLNESK LFSRCYEWRL NMKSGEVKEK YLTGPEKFMD FPVINASFTG IKNRYGYTQV VDPAASYSAD IPKYGALAKL YFGEPCSEFP VGETQQEELI
501: RVEYHTFERN VFCTGSAFVP KEGGIEEDDG WIITFVHNED TGISQVHIID TKKFSGEAVA KITMPFRVPY GFHGAFMPIS F

Best Arabidopsis Sequence Match ( AT3G63520.1 )
(BLAST)

001: MAEKLSDGSS IISVHPRPSK GFSSKLLDLL ERLVVKLMHD ASLPLHYLSG NFAPIRDETP PVKDLPVHGF LPECLNGEFV RVGPNPKFDA VAGYHWFDGD
101: GMIHGVRIKD GKATYVSRYV KTSRLKQEEF FGAAKFMKIG DLKGFFGLLM VNVQQLRTKL KILDNTYGNG TANTALVYHH GKLLALQEAD KPYVIKVLED
201: GDLQTLGIID YDKRLTHSFT AHPKVDPVTG EMFTFGYSHT PPYLTYRVIS KDGIMHDPVP ITISEPIMMH DFAITETYAI FMDLPMHFRP KEMVKEKKMI
301: YSFDPTKKAR FGVLPRYAKD ELMIRWFELP NCFIFHNANA WEEEDEVVLI TCRLENPDLD MVSGKVKEKL ENFGNELYEM RFNMKTGSAS QKKLSASAVD
401: FPRINECYTG KKQRYVYGTI LDSIAKVTGI IKFDLHAEAE TGKRMLEVGG NIKGIYDLGE GRYGSEAIYV PRETAEEDDG YLIFFVHDEN TGKSCVTVID
501: AKTMSAEPVA VVELPHRVPY GFHALFVTEE QLQEQTLI

Arabidopsis Description

CCD1Carotenoid 9,10(9',10')-cleavage dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:O65572]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.