Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 3
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400011015 | Potato | plastid | 87.97 | 87.11 |
| VIT_11s0016g02740.t01 | Wine grape | cytosol | 18.12 | 58.82 |
| KRH52736 | Soybean | mitochondrion, plastid | 56.67 | 58.6 |
| KRH62063 | Soybean | cytosol | 44.81 | 56.31 |
| VIT_04s0008g03510.t01 | Wine grape | cytosol | 50.08 | 53.62 |
| KRH52732 | Soybean | plastid | 51.24 | 53.53 |
| KRH62062 | Soybean | cytosol, plastid | 50.41 | 52.85 |
| VIT_04s0008g03480.t01 | Wine grape | cytosol | 52.88 | 46.19 |
| Os06t0162550-00 | Rice | mitochondrion, plastid | 40.53 | 43.01 |
| KXG19379 | Sorghum | mitochondrion, plastid | 41.19 | 42.02 |
| Zm00001d045232_P001 | Maize | plastid | 38.88 | 38.5 |
| VIT_04s0008g03450.t01 | Wine grape | plastid | 26.52 | 37.27 |
| PGSC0003DMT400071048 | Potato | cytosol, mitochondrion | 22.41 | 26.88 |
| PGSC0003DMT400004978 | Potato | cytosol, mitochondrion, peroxisome | 10.21 | 25.83 |
| PGSC0003DMT400047548 | Potato | cytosol | 15.82 | 25.26 |
| PGSC0003DMT400039054 | Potato | plastid | 23.56 | 24.66 |
| PGSC0003DMT400047553 | Potato | plastid | 22.73 | 24.0 |
| PGSC0003DMT400049305 | Potato | cytosol | 19.77 | 23.58 |
| PGSC0003DMT400004981 | Potato | plastid | 22.08 | 22.67 |
| PGSC0003DMT400004975 | Potato | plastid | 10.87 | 19.3 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400011006 | EnsemblPlantsGene:PGSC0003DMG400004311 | EntrezGene:102600535 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016702 | GO:GO:0046872 | GO:GO:0055114 | InterPro:Carotenoid_Oase |
| PANTHER:PTHR10543 | PANTHER:PTHR10543:SF30 | PFAM:PF03055 | PGSC:PGSC0003DMG400004311 | RefSeq:XP_006359776.1 | UniParc:UPI000295FB43 |
| UniProt:M0ZYX3 | MapMan:35.1 | : | : | : | : |
Description
9-cis-epoxycarotenoid dioxygenase [Source:PGSC_GENE;Acc:PGSC0003DMG400004311]
Coordinates
chr8:+:39185413..39188702
Molecular Weight (calculated)
69009.3 Da
IEP (calculated)
6.122
GRAVY (calculated)
-0.358
Length
607 amino acids
Sequence
(BLAST)
(BLAST)
001: MTANSYALLQ VVTKCSLQRP SLPPKLEHSK NPLSSTFKPI LLKELDHFPN ISLDVPKAIK DTSFNLLEAF VDFIYEFVDQ PLLPCQSNFA PVEEIGEATT
101: VEIVEGKIPD DFPEGVYIRN GPNPLFGGLK STRSIFGESR HMWVEGEGMV HALYLNKENN GGKWKTFYKN KHVQTDSYNM EKDRNKPGFL PAIQGDSPAI
201: LLSYLLNVLR FGMIDKYLSN TNVFEHANKY YSIAENHMPQ EIDIHSLQTQ GNWNFPSESW NRPFTSHPKK APGTGELVII GIDAKKPYFE LGVISADGKK
301: MVHKADLMFD RCAVCHEIGV TQRYNVIMNF PLTIDISRLV LGGQLMKFEK DGYARIGIMP RYGDANSIKW FEVDPCCVFH IINCFEHNDE VVVRACRARQ
401: SVIPGPSSSV NHLETLSKWI KRETSSIDDD SHEFTKESTF PRVCEWRLDM KTGEIKEKKN LSGDEFAMEF PIINEKFSGF RNKFAYLQVV ESTELSGSGF
501: TRFSGLVKLH FEEKKTFNMD EEDELIKAEY HMFPKNTFCS GTSFVPKPEG IDEDDGWIIT FTHNENENIS QVCIIDAKKF TKEPVAIITL SSRVPYGFHG
601: AFMPLTS
101: VEIVEGKIPD DFPEGVYIRN GPNPLFGGLK STRSIFGESR HMWVEGEGMV HALYLNKENN GGKWKTFYKN KHVQTDSYNM EKDRNKPGFL PAIQGDSPAI
201: LLSYLLNVLR FGMIDKYLSN TNVFEHANKY YSIAENHMPQ EIDIHSLQTQ GNWNFPSESW NRPFTSHPKK APGTGELVII GIDAKKPYFE LGVISADGKK
301: MVHKADLMFD RCAVCHEIGV TQRYNVIMNF PLTIDISRLV LGGQLMKFEK DGYARIGIMP RYGDANSIKW FEVDPCCVFH IINCFEHNDE VVVRACRARQ
401: SVIPGPSSSV NHLETLSKWI KRETSSIDDD SHEFTKESTF PRVCEWRLDM KTGEIKEKKN LSGDEFAMEF PIINEKFSGF RNKFAYLQVV ESTELSGSGF
501: TRFSGLVKLH FEEKKTFNMD EEDELIKAEY HMFPKNTFCS GTSFVPKPEG IDEDDGWIIT FTHNENENIS QVCIIDAKKF TKEPVAIITL SSRVPYGFHG
601: AFMPLTS
001: MAEKLSDGSS IISVHPRPSK GFSSKLLDLL ERLVVKLMHD ASLPLHYLSG NFAPIRDETP PVKDLPVHGF LPECLNGEFV RVGPNPKFDA VAGYHWFDGD
101: GMIHGVRIKD GKATYVSRYV KTSRLKQEEF FGAAKFMKIG DLKGFFGLLM VNVQQLRTKL KILDNTYGNG TANTALVYHH GKLLALQEAD KPYVIKVLED
201: GDLQTLGIID YDKRLTHSFT AHPKVDPVTG EMFTFGYSHT PPYLTYRVIS KDGIMHDPVP ITISEPIMMH DFAITETYAI FMDLPMHFRP KEMVKEKKMI
301: YSFDPTKKAR FGVLPRYAKD ELMIRWFELP NCFIFHNANA WEEEDEVVLI TCRLENPDLD MVSGKVKEKL ENFGNELYEM RFNMKTGSAS QKKLSASAVD
401: FPRINECYTG KKQRYVYGTI LDSIAKVTGI IKFDLHAEAE TGKRMLEVGG NIKGIYDLGE GRYGSEAIYV PRETAEEDDG YLIFFVHDEN TGKSCVTVID
501: AKTMSAEPVA VVELPHRVPY GFHALFVTEE QLQEQTLI
101: GMIHGVRIKD GKATYVSRYV KTSRLKQEEF FGAAKFMKIG DLKGFFGLLM VNVQQLRTKL KILDNTYGNG TANTALVYHH GKLLALQEAD KPYVIKVLED
201: GDLQTLGIID YDKRLTHSFT AHPKVDPVTG EMFTFGYSHT PPYLTYRVIS KDGIMHDPVP ITISEPIMMH DFAITETYAI FMDLPMHFRP KEMVKEKKMI
301: YSFDPTKKAR FGVLPRYAKD ELMIRWFELP NCFIFHNANA WEEEDEVVLI TCRLENPDLD MVSGKVKEKL ENFGNELYEM RFNMKTGSAS QKKLSASAVD
401: FPRINECYTG KKQRYVYGTI LDSIAKVTGI IKFDLHAEAE TGKRMLEVGG NIKGIYDLGE GRYGSEAIYV PRETAEEDDG YLIFFVHDEN TGKSCVTVID
501: AKTMSAEPVA VVELPHRVPY GFHALFVTEE QLQEQTLI
Arabidopsis Description
CCD1Carotenoid 9,10(9',10')-cleavage dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:O65572]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.