Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G30100.1 | CDX70775 | AT5G17790.1 | 15340011 |
| AT1G30100.1 | CDX78760 | AT5G17790.1 | 15340011 |
| AT1G30100.1 | CDY16887 | AT5G17790.1 | 15340011 |
| AT1G30100.1 | CDY38459 | AT5G17790.1 | 15340011 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26294 | Canola | plastid | 97.45 | 97.45 |
| AT1G30100.1 | Thale cress | plastid | 93.21 | 93.21 |
| Zm00001d008638_P001 | Maize | cytosol | 10.53 | 75.61 |
| Zm00001d027690_P001 | Maize | cytosol | 9.85 | 75.32 |
| CDX82482 | Canola | cytosol | 49.92 | 74.24 |
| CDX98456 | Canola | cytosol | 32.09 | 74.12 |
| CDY57471 | Canola | cytosol | 49.75 | 73.99 |
| Zm00001d023690_P001 | Maize | cytosol | 15.45 | 69.47 |
| PGSC0003DMT400039054 | Potato | plastid | 68.08 | 69.14 |
| CDY39117 | Canola | mitochondrion | 64.69 | 68.9 |
| Solyc08g016720.1.1 | Tomato | plastid | 67.91 | 68.85 |
| VIT_10s0003g03750.t01 | Wine grape | plastid | 69.44 | 67.6 |
| CDY01534 | Canola | cytosol, plastid | 66.38 | 67.07 |
| CDY55629 | Canola | cytosol, plastid | 66.21 | 66.9 |
| Os12t0617400-01 | Rice | cytosol | 31.58 | 65.72 |
| CDX98455 | Canola | plastid | 66.55 | 65.66 |
| CDX97576 | Canola | plastid | 66.55 | 65.66 |
| CDY33218 | Canola | plastid | 66.38 | 65.38 |
| CDX99475 | Canola | plastid | 64.35 | 65.23 |
| CDX78842 | Canola | plastid | 64.18 | 65.06 |
| KRH58642 | Soybean | plastid | 63.84 | 63.95 |
| CDX88443 | Canola | plastid | 65.03 | 63.62 |
| CDY52448 | Canola | plastid | 64.86 | 63.46 |
| GSMUA_Achr4P22870_001 | Banana | plastid | 63.33 | 62.06 |
| KRH42549 | Soybean | plastid | 61.8 | 61.8 |
| Zm00001d031086_P001 | Maize | plastid | 59.42 | 61.51 |
| GSMUA_Achr4P31460_001 | Banana | plastid | 62.65 | 61.19 |
| GSMUA_Achr6P31180_001 | Banana | plastid | 62.48 | 61.03 |
| GSMUA_Achr2P12950_001 | Banana | plastid | 60.44 | 60.44 |
| GSMUA_Achr5P02570_001 | Banana | plastid | 62.31 | 60.16 |
| TraesCS5A01G374000.1 | Wheat | plastid | 60.27 | 60.07 |
| TraesCS5D01G383500.1 | Wheat | plastid | 60.61 | 60.0 |
| TraesCS5B01G375900.1 | Wheat | plastid | 60.44 | 59.83 |
| Os03t0645900-00 | Rice | plastid | 61.63 | 59.7 |
| GSMUA_Achr7P01250_001 | Banana | plastid | 61.12 | 59.7 |
| Zm00001d033222_P001 | Maize | extracellular | 60.78 | 59.27 |
| HORVU5Hr1G008050.1 | Barley | plastid | 60.78 | 58.98 |
| OQU88453 | Sorghum | plastid | 57.22 | 58.81 |
| Zm00001d018819_P001 | Maize | plastid | 57.05 | 58.64 |
| Zm00001d013689_P001 | Maize | plastid | 59.76 | 58.57 |
| TraesCS5D01G038800.1 | Wheat | plastid | 61.12 | 58.54 |
| TraesCS5B01G029300.1 | Wheat | plastid | 60.95 | 58.47 |
| EER93751 | Sorghum | plastid | 60.61 | 58.43 |
| Zm00001d041319_P001 | Maize | plastid | 59.76 | 58.28 |
| Zm00001d007876_P001 | Maize | plastid | 56.71 | 58.09 |
| Zm00001d000095_P001 | Maize | cytosol | 16.13 | 57.93 |
| TraesCS2D01G251600.1 | Wheat | plastid | 56.88 | 57.56 |
| HORVU5Hr1G054970.1 | Barley | cytosol | 58.74 | 56.91 |
| CDX98457 | Canola | plastid | 30.39 | 56.83 |
| Os07t0154100-01 | Rice | plastid | 56.03 | 56.7 |
| TraesCS2B01G268400.1 | Wheat | plastid | 56.71 | 56.04 |
| TraesCS2A01G250600.1 | Wheat | plastid | 55.86 | 55.48 |
| HORVU5Hr1G044510.1 | Barley | cytosol | 56.2 | 55.17 |
| HORVU5Hr1G092850.2 | Barley | plastid | 60.27 | 55.12 |
| Zm00001d000157_P001 | Maize | cytosol | 9.51 | 53.33 |
| Zm00001d023458_P001 | Maize | cytosol | 12.56 | 52.48 |
| CDX77467 | Canola | plastid | 51.61 | 51.97 |
| CDX85148 | Canola | cytosol | 51.44 | 51.79 |
| Zm00001d042076_P001 | Maize | cytosol, plastid | 32.26 | 45.24 |
| Zm00001d022623_P001 | Maize | cytosol | 25.98 | 41.02 |
| CDX76489 | Canola | plastid | 33.79 | 37.41 |
| CDY53711 | Canola | cytosol | 32.94 | 36.95 |
| CDX93902 | Canola | cytosol | 32.43 | 36.38 |
| Zm00001d035724_P001 | Maize | plastid | 38.88 | 36.06 |
| CDX99397 | Canola | plastid | 35.65 | 35.41 |
| CDX78923 | Canola | plastid | 35.82 | 35.4 |
| CDY34748 | Canola | endoplasmic reticulum, extracellular | 28.18 | 34.37 |
| CDY34746 | Canola | cytosol | 7.3 | 33.59 |
| Zm00001d019813_P001 | Maize | plastid | 10.7 | 33.33 |
| CDY34747 | Canola | cytosol | 7.13 | 31.11 |
| CDX76782 | Canola | mitochondrion | 31.92 | 30.72 |
| CDX76783 | Canola | plastid | 30.73 | 29.62 |
| Zm00001d009286_P001 | Maize | plastid | 11.71 | 27.38 |
| Zm00001d027592_P001 | Maize | mitochondrion | 19.52 | 27.0 |
| Zm00001d033377_P001 | Maize | plastid | 12.05 | 25.0 |
Protein Annotations
| EnsemblPlants:CDY61838 | EnsemblPlantsGene:GSBRNA2T00034476001 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016702 | GO:GO:0046872 | GO:GO:0055114 | InterPro:Carotenoid_Oase | PANTHER:PTHR10543 |
| PANTHER:PTHR10543:SF42 | PFAM:PF03055 | ProteinID:CDY61838 | ProteinID:CDY61838.1 | SEG:seg | UniParc:UPI0004EEB62B |
| UniProt:A0A078J9N8 | MapMan:11.1.1.4 | : | : | : | : |
Description
BnaCnng38510DBnaCnng38510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J9N8]
Coordinates
chrLK034047:-:35215..36984
Molecular Weight (calculated)
65463.4 Da
IEP (calculated)
5.384
GRAVY (calculated)
-0.320
Length
589 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSYIISPN TAKLNLSFAP SDLDAPSPSS SVSYTNTKSR RRKFSTNSVT DSPALLTFPN YPSPNPIIPE KDTSHWNPLQ RAASAAFDFA EAALLSRERS
101: QPLPKTVDPR HQISGNYAPV PEQSVKSSLS VTGKIPDCID GVYLRNGANP LFEPVSGHHL FDGDGMVHAV KITNGDASYS CRFTETERLV QEKRLGSPIY
201: PKAIGELHGH TGIARLMLFY ARGLFGLLNH RNGTGVANAG LVYFHDRLLA MSEDDLPYQV RVTDDGDLET VGRFDFDGQL NSAMIAHPKI DPETKELFAL
301: SYDVVKKPYL KYFRFSPEGE KSPDVEIPLA SPTMMHDFAI TENFVVIPDQ QVVFKLSDMF LGKSPVKYDG EKVSRFAILP KNAEDASEMI WVESPDTFCF
401: HLWNAWESPE TDEVVVIGSC MTPADSIFNE CDEQLNSVLS EIRLNLKTGK STRRTIIPGS VQMNLEAGMV NRNFLGRKTR YAYLAIAELW PKVSGFAKVD
501: LSTGEVKNHF YGYKKYGGEP FFLPRGLESD GEDDGYIMSF VHDEESWKSE LQIVNAVTLE LEATVKLPSR VPYGFHGTFV NSADMVNQA
101: QPLPKTVDPR HQISGNYAPV PEQSVKSSLS VTGKIPDCID GVYLRNGANP LFEPVSGHHL FDGDGMVHAV KITNGDASYS CRFTETERLV QEKRLGSPIY
201: PKAIGELHGH TGIARLMLFY ARGLFGLLNH RNGTGVANAG LVYFHDRLLA MSEDDLPYQV RVTDDGDLET VGRFDFDGQL NSAMIAHPKI DPETKELFAL
301: SYDVVKKPYL KYFRFSPEGE KSPDVEIPLA SPTMMHDFAI TENFVVIPDQ QVVFKLSDMF LGKSPVKYDG EKVSRFAILP KNAEDASEMI WVESPDTFCF
401: HLWNAWESPE TDEVVVIGSC MTPADSIFNE CDEQLNSVLS EIRLNLKTGK STRRTIIPGS VQMNLEAGMV NRNFLGRKTR YAYLAIAELW PKVSGFAKVD
501: LSTGEVKNHF YGYKKYGGEP FFLPRGLESD GEDDGYIMSF VHDEESWKSE LQIVNAVTLE LEATVKLPSR VPYGFHGTFV NSADMVNQA
001: MACSYILTPN PTKLNLSFAP SDLDAPSPSS SVSFTNTKPR RRKLSANSVS DTPNLLNFPN YPSPNPIIPE KDTSRWNPLQ RAASAALDFA ETALLRRERS
101: KPLPKTVDPR HQISGNYAPV PEQSVKSSLS VDGKIPDCID GVYLRNGANP LFEPVSGHHL FDGDGMVHAV KITNGDASYS CRFTETERLV QEKQLGSPIF
201: PKAIGELHGH SGIARLMLFY ARGLFGLLNH KNGTGVANAG LVYFHDRLLA MSEDDLPYQV RVTDNGDLET IGRFDFDGQL SSAMIAHPKI DPVTKELFAL
301: SYDVVKKPYL KYFKFSPEGE KSPDVEIPLA SPTMMHDFAI TENFVVIPDQ QVVFKLSDMF LGKSPVKYDG EKISRFGILP RNAKDASEMV WVESPETFCF
401: HLWNAWESPE TDEVVVIGSC MTPADSIFNE CDEQLNSVLS EIRLNLKTGK STRRTIIPGS VQMNLEAGMV NRNLLGRKTR YAYLAIAEPW PKVSGFAKVD
501: LSTGEVKNHF YGGKKYGGEP FFLPRGLESD GEDDGYIMSF VHDEESWESE LHIVNAVTLE LEATVKLPSR VPYGFHGTFV NSADMLNQA
101: KPLPKTVDPR HQISGNYAPV PEQSVKSSLS VDGKIPDCID GVYLRNGANP LFEPVSGHHL FDGDGMVHAV KITNGDASYS CRFTETERLV QEKQLGSPIF
201: PKAIGELHGH SGIARLMLFY ARGLFGLLNH KNGTGVANAG LVYFHDRLLA MSEDDLPYQV RVTDNGDLET IGRFDFDGQL SSAMIAHPKI DPVTKELFAL
301: SYDVVKKPYL KYFKFSPEGE KSPDVEIPLA SPTMMHDFAI TENFVVIPDQ QVVFKLSDMF LGKSPVKYDG EKISRFGILP RNAKDASEMV WVESPETFCF
401: HLWNAWESPE TDEVVVIGSC MTPADSIFNE CDEQLNSVLS EIRLNLKTGK STRRTIIPGS VQMNLEAGMV NRNLLGRKTR YAYLAIAEPW PKVSGFAKVD
501: LSTGEVKNHF YGGKKYGGEP FFLPRGLESD GEDDGYIMSF VHDEESWESE LHIVNAVTLE LEATVKLPSR VPYGFHGTFV NSADMLNQA
Arabidopsis Description
NCED5Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9C6Z1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.