Factsheet for Os07t0154100-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0815700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G30100.1	Os01t0815700-01	AT5G17790.1	15340011

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU88453	Sorghum	plastid	79.73	80.98
Zm00001d018819_P001	Maize	plastid	79.38	80.63
TraesCS2D01G251600.1	Wheat	plastid	79.55	79.55
Zm00001d007876_P001	Maize	plastid	78.35	79.3
TraesCS2B01G268400.1	Wheat	plastid	78.87	77.01
TraesCS2A01G250600.1	Wheat	plastid	77.32	75.89
Bra001552.1-P	Field mustard	cytosol	46.56	68.43
CDX82482	Canola	cytosol	46.39	68.18
CDY57471	Canola	cytosol	45.88	67.42
PGSC0003DMT400071048	Potato	cytosol, mitochondrion	58.08	66.8
Os12t0617400-01	Rice	cytosol	32.3	66.43
CDX98456	Canola	cytosol	28.87	65.88
Os03t0645900-00	Rice	plastid	66.32	63.49
GSMUA_Achr2P12950_001	Banana	plastid	63.57	62.82
Bra012603.1-P	Field mustard	cytosol	47.59	62.67
CDY39117	Canola	mitochondrion	59.45	62.57
GSMUA_Achr6P31180_001	Banana	plastid	63.57	61.36
GSMUA_Achr7P01250_001	Banana	plastid	63.57	61.36
GSMUA_Achr4P22870_001	Banana	plastid	62.71	60.73
GSMUA_Achr5P02570_001	Banana	plastid	63.57	60.66
GSMUA_Achr4P31460_001	Banana	plastid	61.0	58.87
CDY33218	Canola	plastid	60.48	58.86
VIT_19s0093g00550.t01	Wine grape	plastid	61.51	58.78
Bra021558.1-P	Field mustard	plastid	60.14	58.53
CDX98455	Canola	plastid	59.79	58.29
CDX97576	Canola	plastid	59.79	58.29
Bra027336.1-P	Field mustard	plastid	59.79	58.29
Bra008358.1-P	Field mustard	plastid	58.76	58.26
CDY52448	Canola	plastid	60.14	58.14
Zm00001d042076_P001	Maize	cytosol, plastid	41.92	58.1
Bra035033.1-P	Field mustard	plastid	59.97	57.97
PGSC0003DMT400039054	Potato	plastid	57.73	57.93
VIT_10s0003g03750.t01	Wine grape	plastid	60.14	57.85
Solyc07g056570.1.1	Tomato	plastid	60.14	57.85
CDX88443	Canola	plastid	59.79	57.81
Solyc08g016720.1.1	Tomato	plastid	57.39	57.49
AT3G14440.1	Thale cress	plastid	58.59	56.93
AT1G30100.1	Thale cress	plastid	57.22	56.54
Bra032359.1-P	Field mustard	plastid	56.87	56.29
CDY26294	Canola	plastid	56.87	56.2
AT4G18350.1	Thale cress	cytosol, plastid	56.19	56.09
CDY61838	Canola	plastid	56.7	56.03
CDX99475	Canola	plastid	55.67	55.77
Bra013298.1-P	Field mustard	plastid	55.67	55.77
CDX78842	Canola	plastid	55.67	55.77
CDY55629	Canola	cytosol, plastid	55.67	55.57
Os04t0131800-00	Rice	extracellular	16.49	55.49
CDY01534	Canola	cytosol, plastid	55.5	55.4
Zm00001d022623_P001	Maize	cytosol	34.54	53.89
AT1G78390.1	Thale cress	cytosol, plastid	60.65	53.73
CDX98457	Canola	plastid	27.66	51.11
KRH45171	Soybean	plastid	11.68	41.21
Os12t0640600-01	Rice	plasma membrane	35.05	37.78
Os02t0704000-01	Rice	plastid	38.83	35.42
Os12t0435200-01	Rice	plastid	33.85	34.2
Os06t0162550-00	Rice	mitochondrion, plastid	23.2	23.6
Os09t0321200-00	Rice	plastid	22.51	22.98
Os08t0371608-00	Rice	cytosol	20.27	21.73
Os08t0369800-01	Rice	plastid	14.26	21.73

Protein Annotations

MapMan:11.1.1.4	EMBL:AK119780	EMBL:AY838900	ProteinID:BAD31592.1	ProteinID:BAF20827.1	ProteinID:BAT00112.1
InterPro:Carotenoid_Oase	ncoils:Coil	ProteinID:EAZ38731.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009688	GO:GO:0009987
GO:GO:0016491	GO:GO:0016702	GO:GO:0045549	GO:GO:0046872	GO:GO:0051213	GO:GO:0055114
EnsemblPlantsGene:Os07g0154100	EnsemblPlants:Os07t0154100-01	PFAM:PF03055	PANTHER:PTHR10543	PANTHER:PTHR10543:SF49	UniProt:Q69NX5
UniParc:UPI00003FE8AA	SEG:seg	:	:	:	:

Description

9-CIS-EPOXYCAROTENOID DIOXYGENASE 3Similar to Viviparous-14. (Os07t0154100-01)

Coordinates

chr7:+:2870686..2872829

Molecular Weight (calculated)

62951.1 Da

IEP (calculated)

6.659

GRAVY (calculated)

-0.233

Length

582 amino acids

Sequence
(BLAST)

001: MASSAPSAPG LAPVAKPPPP PSKVKVATAT VPTNGKIKQG ARPMRVSAPP VEPRRRMNPL QRLAAAAIDA VEEGLVAGLL ERGHALPRTA DPAVQIAGNY
101: APVGERPPVR GLPVSGRLPA CLDGVYVRNG ANPLHAPRAG HHLFDGDGML HAVRLAGGRA ESYACRFTET ARLRQEREMG RPVFPKAIGE LHGHSGVARL
201: LLFGSRALCG VLDASRGIGV ANAGLVYHDG RLLAMSEDDL PYHVRVTHDG DLETVGRYDF HGQLDADGTM IAHPKLDPVT GELFALSYNV VSKPYLKYFY
301: FTADGRKSRD VDIPVGAPTM IHDFAVTENY AVVPDQQIVF KLQEMVRGGS PVVYDREKAS RFGVLPKRAA DASELRWVEV PGCFCFHLWN AWEDDATGEI
401: VVIGSCMTPP DAVFNEPSQS PEEESFRSVL SEIRLDPRTG VSRRRDVLRD AAEQVNLEAG MVNRQLLGRK TRYAYLAIAE PWPRVSGFAK VDLESGTAEK
501: FIYGEGRYGG EPCFVPRAGA AAEDDGHVLC FVHDEERGTS ELVVVDAGSE AMEEVAAVKL PGRVPYGLHG TFIGANELQR QA

Best Arabidopsis Sequence Match ( AT1G78390.1 )
(BLAST)

001: MTIITIISGM YIYSLLSQDA HHSQYGQNTN LVLKKPIPKP QTAAFNQEST MASTTLLPST STQFLDRTFS TSSSSSRPKL QSLSFSSTLR NKKLVVPCYV
101: SSSVNKKSSV SSSLQSPTFK PPSWKKLCND VTNLIPKTTN QNPKLNPVQR TAAMVLDAVE NAMISHERRR HPHPKTADPA VQIAGNFFPV PEKPVVHNLP
201: VTGTVPECIQ GVYVRNGANP LHKPVSGHHL FDGDGMVHAV RFDNGSVSYA CRFTETNRLV QERECGRPVF PKAIGELHGH LGIAKLMLFN TRGLFGLVDP
301: TGGLGVANAG LVYFNGHLLA MSEDDLPYHV KVTQTGDLET SGRYDFDGQL KSTMIAHPKI DPETRELFAL SYDVVSKPYL KYFRFTSDGE KSPDVEIPLD
401: QPTMIHDFAI TENFVVIPDQ QVVFRLPEMI RGGSPVVYDE KKKSRFGILN KNAKDASSIQ WIEVPDCFCF HLWNSWEEPE TDEVVVIGSC MTPPDSIFNE
501: HDETLQSVLS EIRLNLKTGE STRRPVISEQ VNLEAGMVNR NLLGRKTRYA YLALTEPWPK VSGFAKVDLS TGEIRKYIYG EGKYGGEPLF LPSGDGEEDG
601: GYIMVFVHDE EKVKSELQLI NAVNMKLEAT VTLPSRVPYG FHGTFISKED LSKQALC

Arabidopsis Description

NCED99-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M9F5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.